Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3266g00046 ATGAATCCCTTTCTTCTTATTCTTCTTCTTTCGCTTTTCGTTTCGGTTTCTTCTTTGTCTCAACCGGAGCTCCGATCTCTCTTGGAATTCAAGAAAGGGATAACAACAGATCCGCTTCGGAAGGTGTTGGAGTCATGGAACCCTACTTCACTAGCTGACTACACTGCTTGTCCTCGCTCATGGGAGGGAATCCTCTGCGACGACCTCACCGGAAACGTCACCGGCATCGTCCTCGACCGCCTCGGCCTCGGCGGCGAACTCAAGTTCCAAACTCTCCTCGAACTGAAGATGCTCAGAAACCTAAGCCTCTCCGGGAACCATTTCACCGGAAGGTTAACCCCTTCACTCGGCACGCTCACCACTCTCCAGCATTTGGATCTTTCACAAAACAAGTTCTATGGTCCCATCCCTTCTCGGATCAACGAACTCTGGGGACTCAATTACCTCAATTTGTCCTTCAATGAATTCAAGGGTGGCTTCCCCACCAGCTTGACCAACCTTCAACAGCTCAGGGTCCTCGATTTGCATTCCAACGCCCTCTGGGGTGACATTGGGGACATTCTCTCCACTCTGCGGAACGTCGAACACGTGGATTTGAGCCTCAATCAGTTCTTCGGGGGGCTTGACCTCTCTGTTCAGAATGTTTCTGGCTTGGCCAATACAGTCCATTTTTTGAACTTTAGTCATAACAACTTGAATGGTCCCTTCTTTGGAAGCGATTCCGTTCAGTTGTTTCGCAACTTGCAAGTTCTTGATTTGACTAATAACTTGATTACAGGCTCAATTGCTGTAATCAACTCCACAACTTTGAATAGTTTGAATCTTTCATCAAATGGTTTATCAGGCTCTTTGCCAACATCTTTGGGAAGTTGTACAGTGATAGACTTGAGCAGGAATATGTTATCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCACGTTGGAGGTTATTGATCTGAGTTCAAACAAGCTGTCAGGATCCTTACCTCCTATTTTAGGGACCTATTCAAAATTGTCCACCATTGACTTAAGTTTAAATGAACTTAGTGGATCCATTCCAGGTAGTTTAGTAGCTTCACCGTCACTGACAAGACTAAATCTTTCTGGAAATCTATTTACGGGGGCACTTCGGCTTCAAAGTTCAGGGGCAAGTGAATTACTACTCATGCCTCCTTATCAGCCAATGGAATATCTTGATGTATCTAATAACTCCTTAGAAGGTGTCTTGCCTTCTGATATAAGTAGGATGGGTGGGTTAAAACTGCTGAATCTAGCAAGGAATGGCTTTTCCGGACAGCTGCCAGATGAGTTGAGCAAACTTTCTTATTTGGAGTACCTCGATTTGTCTAACAACAAATTTACTGGAAATATTCCTGATAAGCTTTCGTCCAGCATAACTGTATTTAATGTGTCCTATAATGATCTATCTGGTCGTGTTCCTGAAAATTTGCAGCGGTTCCCCCCTTCATCCTTTCACCCCGGAAATGAAAAGCTAAGGTTACCAAATGGTTCTCCTGGAGCTTCCTCAGTGCCTGATAATATTCCAGATACAGGTAGACATCATAATTCAAAGGGAAATATCAGGATAGCAATTATTCTTGCCTCTGTGGGTGCTGCTGTGATGATTGCTTTTGTTTTATTGGCTTATCATAGAACACAACTAAAAGAATTTCGTGGAAGAAGTGAGTTCACTGGTCAAACTACTGAAAGAGATGTCAAGTTAGGAGGACTCACGAGGCCTTCCCTCTTCAAGTTCAATTCAAATGTTCAACCCCCAACCACTTCGTTGAGCTTTTCAAATGATCACTTGTTGACTTCCAATTCGAGGTCACTCTCTGGACAGACAGAGTTTATAACTGAAATTTCTGAGCACGGCTTACCTCAGGGAATGGTAGCAACTAGTTCAGCATCTGTAACTCCTAATTTGATGGATAACCCTCCCACGTCATCTGGAAGAAAGTCTTCTCCTGGTTCCCCATTGTCATCCTCACCCCGTTTTATAGAGGGCAGTGAAAAGCCGGCGATGTTGGACGTTTACTCCCCAGATCGGCTGGCTGGGGAACTGTTCTTCCTGGATTCTTCGATGGCATTCACTGCTGAGGATTTATCTCGAGCTCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATACAAAGCTACTCTCGACAGTGGTCATATGTTGACTGTAAAATGGTTACGAGTGGGATTGGTCAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCCATGAGGCATCCAAACATTGTCTCATTACGGGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTTTTAGCTGACTACATACATGGGGACAGCTTGGCCCTCCATCTCTATGAGACCACACCCCGGAGGCACTCGAGATTATCATTCAGCCAGAGATTAAGAGTTGCTGTTGATGTTGCTCGATGTCTTTTATACCTTCACGATCGAGGGCTTCCCCATGGAAATCTGAAGCCAACAAATATTTTGTTAGCAGGCCATGAAAACAATGCTCGTCTTAGTGACTATGGTCTGCACCGGCTTATGACCCCAGCTGGAATTGCAGAGCAGATACTAAATCTAGGAGCACTCGGATACCGTGCTCCAGAACTAGCTGCTGCATCCAAACCAGTTCCATCGTTTAAGGCTGATGTCTATGCACTTGGTGTGATCCTAATGGAGTTATTAACGAGGAAAAGTGCAGGTGACATAATATCAGGCCAATCAGGCGCTGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATTGCAGGTGGGGAAGATTCCTCCAAAGAGATGGATGAACTGCTTGCAATATCTCTGAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTCTGTTCTATATCGGTTTGA 2958 0.4479 MNPFLLILLLSLFVSVSSLSQPELRSLLEFKKGITTDPLRKVLESWNPTSLADYTACPRSWEGILCDDLTGNVTGIVLDRLGLGGELKFQTLLELKMLRNLSLSGNHFTGRLTPSLGTLTTLQHLDLSQNKFYGPIPSRINELWGLNYLNLSFNEFKGGFPTSLTNLQQLRVLDLHSNALWGDIGDILSTLRNVEHVDLSLNQFFGGLDLSVQNVSGLANTVHFLNFSHNNLNGPFFGSDSVQLFRNLQVLDLTNNLITGSIAVINSTTLNSLNLSSNGLSGSLPTSLGSCTVIDLSRNMLSGDISVIQNWEATLEVIDLSSNKLSGSLPPILGTYSKLSTIDLSLNELSGSIPGSLVASPSLTRLNLSGNLFTGALRLQSSGASELLLMPPYQPMEYLDVSNNSLEGVLPSDISRMGGLKLLNLARNGFSGQLPDELSKLSYLEYLDLSNNKFTGNIPDKLSSSITVFNVSYNDLSGRVPENLQRFPPSSFHPGNEKLRLPNGSPGASSVPDNIPDTGRHHNSKGNIRIAIILASVGAAVMIAFVLLAYHRTQLKEFRGRSEFTGQTTERDVKLGGLTRPSLFKFNSNVQPPTTSLSFSNDHLLTSNSRSLSGQTEFITEISEHGLPQGMVATSSASVTPNLMDNPPTSSGRKSSPGSPLSSSPRFIEGSEKPAMLDVYSPDRLAGELFFLDSSMAFTAEDLSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVSLRAYYWGPREQERLLLADYIHGDSLALHLYETTPRRHSRLSFSQRLRVAVDVARCLLYLHDRGLPHGNLKPTNILLAGHENNARLSDYGLHRLMTPAGIAEQILNLGALGYRAPELAAASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEDSSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3266g00046 985 Pfam Leucine rich repeat 397 454 IPR001611 GO:0005515
Gabi3266g00046 985 Pfam Leucine rich repeat 314 372 IPR001611 GO:0005515
Gabi3266g00046 985 Pfam Protein kinase domain 709 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3266g00046 985 FunFam Leucine-rich repeat receptor-like protein kinase 690 782 - -
Gabi3266g00046 985 Gene3D Ribonuclease Inhibitor 20 208 IPR032675 -
Gabi3266g00046 985 MobiDBLite consensus disorder prediction 638 666 - -
Gabi3266g00046 985 PANTHER OS07G0626500 PROTEIN 321 983 - -
Gabi3266g00046 985 FunFam Nuclear pore complex protein NUP107 20 186 - -
Gabi3266g00046 985 ProSiteProfiles Protein kinase domain profile. 705 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3266g00046 985 ProSiteProfiles Leucine-rich repeat profile. 247 269 IPR001611 GO:0005515
Gabi3266g00046 985 FunFam Pollen receptor-like kinase 1 783 985 - -
Gabi3266g00046 985 Gene3D Phosphorylase Kinase; domain 1 684 782 - -
Gabi3266g00046 985 Gene3D Ribonuclease Inhibitor 209 506 IPR032675 -
Gabi3266g00046 985 SUPERFAMILY L domain-like 46 377 - -
Gabi3266g00046 985 FunFam Leucine-rich repeat receptor protein kinase EMS1 389 483 - -
Gabi3266g00046 985 MobiDBLite consensus disorder prediction 638 668 - -
Gabi3266g00046 985 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Gabi3266g00046 985 MobiDBLite consensus disorder prediction 485 513 - -
Gabi3266g00046 985 SUPERFAMILY L domain-like 396 483 - -
Gabi3266g00046 985 SUPERFAMILY Protein kinase-like (PK-like) 708 980 IPR011009 -
Gabi3266g00046 985 Gene3D Transferase(Phosphotransferase) domain 1 784 985 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3266g00046 Gabi-Chr3266 353747 359715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3266g00046 122 976 Receptor kinase-like Gene Family AT5G07180 27.051 6.49e-61 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3266g00046 Pkinase 2.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3266g00046 - - gmx:100802768 1568.13