Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3266g00045 ATGAATCCCTTTCTTCTTATTCTTCTTCTTTCGCTTTTCGTTTCGGTTTCTTCTTTGTCTCAACCGGAGCTCCGATCTCTCTTGGAATTCAAGAAAGGGATAACAACAGATCCGCTTCGGAAGGTGTTGGAGTCATGGAACCCTACTTCACTAGCTGACTACACTGCTTGTCCTCGCTCATGGGAGGGAATCCTCTGCGACGACCTCACCGGAAACGTCACCGGCATCGTCCTCGACCGCCTCGGCCTCGGCGGCGAACTCAAGTTCCAAACTCTCCTCGAACTGAAGATGCTCAGAAACCTAAGCCTCTCCGGGAACCATTTCACCGGAAGGTTAACCCCTTCACTCGGCACGCTCACCACTCTCCAGCATTTGGATCTTTCACAAAACAAGTTCTATGGTCCCATCCCTTCTCGGATCAACGAACTCTGGGGACTCAATTACCTCAATTTGTCCTTCAATGAATTCAAGGGTGGCTTCCCCACCAGCTTGACCAACCTTCAACAGCTCAGGGTCCTCGATTTGCATTCCAACGCCCTCTGGGGTGACATTGGGGACATTCTCTCCACTCTGCGGAACGTCGAACACGTGGATTTGAGCCTCAATCAGTTCTTCGGGGGGCTTGACCTCTCTGTTCAGAATGTTTCTGGCTTGGCCAATACAGTCCATTTTTTGAACTTTAGTCATAACAACTTGAATGGTCCCTTCTTTGGAAGCGATTCCGTTCAGTTGTTTCGCAACTTGCAAGTTCTTGATTTGACTAATAACTTGATCAAGGGGGAGCTTCCTTCTTTTGGGTCCTTGCCTGGGCTTCAGGTTCTGCGATTTGGCCGCAATCTGTTCTTTGGGTCTGTACCGGAGGAGTTGTTGCAGAGTTCTGTGTCGTTGGAAGAATTGGATCTTAGTGTCAATGGGTTTACTGGCTCAATTGCTGTAATCAACTCCACAACTTTGAATAGTTTGAATCTTTCATCAAATGGTTTATCAGGCTCTTTGCCAACATCTTTGGGAAGTTGTACAGTGATAGACTTGAGCAGGAATATGTTATCTGGTGACATTTCTGTTATACAGAACTGGGAAGCCACGTTGGAGGTTATTGATCTGAGTTCAAACAAGCTGTCAGGATCCTTACCTCCTATTTTAGGGACCTATTCAAAATTGTCCACCATTGACTTAAGTTTAAATGAACTTAGTGGATCCATTCCAGGTAGTTTAGTAGCTTCACCGTCACTGACAAGACTAAATCTTTCTGGAAATCTATTTACGGGGGCACTTCGGCTTCAAAGTTCAGGGGCAAGTGAATTACTACTCATGCCTCCTTATCAGCCAATGGAATATCTTGATGTATCTAATAACTCCTTAGAAGGTGTCTTGCCTTCTGATATAAGTAGGATGGGTGGGTTAAAACTGCTGAATCTAGCAAGGAATGGCTTTTCCGGACAGCTGCCAGATGAGTTGAGCAAACTTTCTTATTTGGAGTACCTCGATTTGTCTAACAACAAATTTACTGGAAATATTCCTGATAAGCTTTCGTCCAGCATAACTGTATTTAATGTGTCCTATAATGATCTATCTGGTCGTGTTCCTGAAAATTTGCAGCGGTTCCCCCCTTCATCCTTTCACCCCGGAAATGAAAAGCTAAGGTTACCAAATGGTTCTCCTGGAGCTTCCTCAGTGCCTGATAATATTCCAGATACAGGTAGACATCATAATTCAAAGGGAAATATCAGGATAGCAATTATTCTTGCCTCTGTGGGTGCTGCTGTGATGATTGCTTTTGTTTTATTGGCTTATCATAGAACACAACTAAAAGAATTTCGTGGAAGAAGTGAGTTCACTGGTCAAACTACTGAAAGAGATGTCAAGTTAGGAGGACTCACGAGGCCTTCCCTCTTCAAGTTCAATTCAAATGTTCAACCCCCAACCACTTCGTTGAGCTTTTCAAATGATCACTTGTTGACTTCCAATTCGAGGTCACTCTCTGGACAGACAGAGTTTATAACTGAAATTTCTGAGCACGGCTTACCTCAGGGAATGGTAGCAACTAGTTCAGCATCTGTAACTCCTAATTTGATGGATAACCCTCCCACGTCATCTGGAAGAAAGTCTTCTCCTGGTTCCCCATTGTCATCCTCACCCCGTTTTATAGAGGGCAGTGAAAAGCCGGCGATGTTGGACGTTTACTCCCCAGATCGGCTGGCTGGGGAACTGTTCTTCCTGGATTCTTCGATGGCATTCACTGCTGAGGATTTATCTCGAGCTCCAGCTGAAGTTCTTGGCAGAAGTAGCCATGGCACTTTATACAAAGCTACTCTCGACAGTGGTCATATGTTGACTGTAAAATGGTTACGAGTGGGATTGGTCAAACATAAAAAGGAATTTGCTAGAGAAGTTAAAAGGATTGGTTCCATGAGGCATCCAAACATTGTCTCATTACGGGCATACTATTGGGGGCCTAGGGAACAAGAGAGGCTTCTTTTAGCTGACTACATACATGGGGACAGCTTGGCCCTCCATCTCTATGAGACCACACCCCGGAGGCACTCGAGATTATCATTCAGCCAGAGATTAAGAGTTGCTGTTGATGTTGCTCGATGTCTTTTATACCTTCACGATCGAGGGCTTCCCCATGGAAATCTGAAGCCAACAAATATTTTGTTAGCAGGCCATGAAAACAATGCTCGTCTTAGTGACTATGGTCTGCACCGGCTTATGACCCCAGCTGGAATTGCAGAGCAGATACTAAATCTAGGAGCACTCGGATACCGTGCTCCAGAACTAGCTGCTGCATCCAAACCAGTTCCATCGTTTAAGGCTGATGTCTATGCACTTGGTGTGATCCTAATGGAGTTATTAACGAGGAAAAGTGCAGGTGACATAATATCAGGCCAATCAGGCGCTGTTGATCTTACAGATTGGGTTAGGCTGTGTGAGCGAGAAGGAAGGGTAATGGACTGTATTGACAGAGACATTGCAGGTGGGGAAGATTCCTCCAAAGAGATGGATGAACTGCTTGCAATATCTCTGAGGTGTATTCTCCCTGTAAATGAGAGGCCTAACATCAGACAAGTTTTTGACGATCTCTGTTCTATATCGGTTTGA 3102 0.4507 MNPFLLILLLSLFVSVSSLSQPELRSLLEFKKGITTDPLRKVLESWNPTSLADYTACPRSWEGILCDDLTGNVTGIVLDRLGLGGELKFQTLLELKMLRNLSLSGNHFTGRLTPSLGTLTTLQHLDLSQNKFYGPIPSRINELWGLNYLNLSFNEFKGGFPTSLTNLQQLRVLDLHSNALWGDIGDILSTLRNVEHVDLSLNQFFGGLDLSVQNVSGLANTVHFLNFSHNNLNGPFFGSDSVQLFRNLQVLDLTNNLIKGELPSFGSLPGLQVLRFGRNLFFGSVPEELLQSSVSLEELDLSVNGFTGSIAVINSTTLNSLNLSSNGLSGSLPTSLGSCTVIDLSRNMLSGDISVIQNWEATLEVIDLSSNKLSGSLPPILGTYSKLSTIDLSLNELSGSIPGSLVASPSLTRLNLSGNLFTGALRLQSSGASELLLMPPYQPMEYLDVSNNSLEGVLPSDISRMGGLKLLNLARNGFSGQLPDELSKLSYLEYLDLSNNKFTGNIPDKLSSSITVFNVSYNDLSGRVPENLQRFPPSSFHPGNEKLRLPNGSPGASSVPDNIPDTGRHHNSKGNIRIAIILASVGAAVMIAFVLLAYHRTQLKEFRGRSEFTGQTTERDVKLGGLTRPSLFKFNSNVQPPTTSLSFSNDHLLTSNSRSLSGQTEFITEISEHGLPQGMVATSSASVTPNLMDNPPTSSGRKSSPGSPLSSSPRFIEGSEKPAMLDVYSPDRLAGELFFLDSSMAFTAEDLSRAPAEVLGRSSHGTLYKATLDSGHMLTVKWLRVGLVKHKKEFAREVKRIGSMRHPNIVSLRAYYWGPREQERLLLADYIHGDSLALHLYETTPRRHSRLSFSQRLRVAVDVARCLLYLHDRGLPHGNLKPTNILLAGHENNARLSDYGLHRLMTPAGIAEQILNLGALGYRAPELAAASKPVPSFKADVYALGVILMELLTRKSAGDIISGQSGAVDLTDWVRLCEREGRVMDCIDRDIAGGEDSSKEMDELLAISLRCILPVNERPNIRQVFDDLCSISV 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3266g00045 1033 Gene3D Ribonuclease Inhibitor 290 554 IPR032675 -
Gabi3266g00045 1033 ProSiteProfiles Leucine-rich repeat profile. 247 269 IPR001611 GO:0005515
Gabi3266g00045 1033 Gene3D Ribonuclease Inhibitor 185 288 IPR032675 -
Gabi3266g00045 1033 Gene3D Ribonuclease Inhibitor 23 184 IPR032675 -
Gabi3266g00045 1033 FunFam Leucine-rich repeat receptor protein kinase EMS1 437 531 - -
Gabi3266g00045 1033 SUPERFAMILY Protein kinase-like (PK-like) 756 1028 IPR011009 -
Gabi3266g00045 1033 Pfam Leucine rich repeat 362 420 IPR001611 GO:0005515
Gabi3266g00045 1033 Pfam Leucine rich repeat 445 502 IPR001611 GO:0005515
Gabi3266g00045 1033 Pfam Protein kinase domain 757 1023 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3266g00045 1033 MobiDBLite consensus disorder prediction 686 716 - -
Gabi3266g00045 1033 FunFam Leucine-rich repeat receptor-like protein kinase 738 830 - -
Gabi3266g00045 1033 SUPERFAMILY L domain-like 444 537 - -
Gabi3266g00045 1033 Gene3D Phosphorylase Kinase; domain 1 732 830 - -
Gabi3266g00045 1033 PANTHER OS07G0626500 PROTEIN 369 1031 - -
Gabi3266g00045 1033 FunFam Pollen receptor-like kinase 1 831 1033 - -
Gabi3266g00045 1033 Gene3D Transferase(Phosphotransferase) domain 1 832 1033 - -
Gabi3266g00045 1033 FunFam Nuclear pore complex protein NUP107 20 186 - -
Gabi3266g00045 1033 SUPERFAMILY RNI-like 78 423 - -
Gabi3266g00045 1033 MobiDBLite consensus disorder prediction 533 561 - -
Gabi3266g00045 1033 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Gabi3266g00045 1033 MobiDBLite consensus disorder prediction 686 714 - -
Gabi3266g00045 1033 ProSiteProfiles Protein kinase domain profile. 753 1033 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3266g00045 Gabi-Chr3266 353747 359715 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3266g00045 385 535 Receptor kinase-like Gene Family AT3G56370 30.519 2.62e-10 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3266g00045 Pkinase 2.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3266g00045 - - gmx:100802768 1674.06