Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3266g00027 ATGGCGCCGAAGCAGAGAACAGCGAGAGTAAGCAGAAACCCCGAATTGATAAGGGGAATTGGAAAATACTCAAGGTCGAAGATGTACCATAAGAGAGGTATCTGGGCCATTAAGGCTAAGAACGGCGGCGTTTTCCCTCGCCACGATCCCAACCCTAAGCCTCAAGCTCCACCTGAGAAACCCTCCAAGTTCTACCCTGCTGATGATGTCAAGAAGCCTCTTGTCAACAAGCACAAGCCCAAACCCACTAAGCTCAGGGCTAGCATTACTCCCGGGACAGTGCTGATTATTCTTGCTGGCAGGTTTAAGGGAAAAAGAGTTGTCTTTCTGAAGCAGCTTCCTTCTGGGTTGCTTCTCGTAACCGGTCCTTTCAAGGTCAATGGAGTTCCTTTGAGACGACTGAATCAGTCATATGTTATTGGCACGTCAACCAAAGTAGATGTTTCTGCAGTTAATGTGGATAAATTCGATGACAAGTACTTCTCAAAGGAAGTCCAGAAAAAGAACAAGAAGGGAGAAGGCGAGTTCTTTGAGGCAGAGAAGGAGGAGAAAAAAGAGCTCCCGCAGCAGAAGAAAGATGACCAAAAGACTGTGGATTCCGCTTTGATCAAAGCCATTGAGAGTGTTCCAGAATTGAAGGCTTACCTTGGTGCAAGGTTTTCATTGAAGGGGGGCATGAAGCCTCACGAGCTAGTCTTCTAG 702 0.4715 MAPKQRTARVSRNPELIRGIGKYSRSKMYHKRGIWAIKAKNGGVFPRHDPNPKPQAPPEKPSKFYPADDVKKPLVNKHKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRLNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEVQKKNKKGEGEFFEAEKEEKKELPQQKKDDQKTVDSALIKAIESVPELKAYLGARFSLKGGMKPHELVF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3266g00027 233 CDD KOW_RPL6 81 233 IPR041997 -
Gabi3266g00027 233 MobiDBLite consensus disorder prediction 176 197 - -
Gabi3266g00027 233 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Gabi3266g00027 233 SUPERFAMILY Translation proteins SH3-like domain 87 178 IPR008991 -
Gabi3266g00027 233 MobiDBLite consensus disorder prediction 40 84 - -
Gabi3266g00027 233 FunFam 60S ribosomal protein L6 87 171 - -
Gabi3266g00027 233 Gene3D - 87 172 IPR014722 -
Gabi3266g00027 233 PANTHER 60S RIBOSOMAL PROTEIN L6 6 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Gabi3266g00027 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3266g00027 Gabi-Chr3266 213882 215647 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3266g00027 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 81.545 1.12e-122 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3266g00027 K02934 - pvy:116113922 372.474