Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3266g00015 ATGGATCAAGTAGATATTGGCCAAGACGGTGAAGGGATTAAGCTGTTTGGCACAAGAATAACGTTGCATGGTAGACAAAGAAACGAAGATAAAAAGAGCAGTGAAGAAGGGACAGAGGAGAAGAGGCCTGCAGATAAGACCATACAGTGCCCAAGATGCAAGAGCATGGAAACCAAGTTCTGTTATTTCAATAACTACAACGTTAATCAGCCTAGGCATTTCTGCAAGGGCTGCCTGAGATACTGGACCGCCGGCGGAGCCCTCCGCAACGTCCCCGTAGGGGCTGGCCGTCGAAAGGCGAAACAGCCATGCCATGACGCCGGTGGTTTACCGGACGGTGACCTATATGAAGTATCCACTGTCCAAAAGTTTGGTTTTGATGAGTGGCATGTTTCCACCATGGTCAACGGTGGTTTCCGGCAGCTTTTTCCATCTAAACGGCGGAGGACGAGCTCTGGTGGTCAACCTTGTTAA 474 0.4979 MDQVDIGQDGEGIKLFGTRITLHGRQRNEDKKSSEEGTEEKRPADKTIQCPRCKSMETKFCYFNNYNVNQPRHFCKGCLRYWTAGGALRNVPVGAGRRKAKQPCHDAGGLPDGDLYEVSTVQKFGFDEWHVSTMVNGGFRQLFPSKRRRTSSGGQPC 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3266g00015 157 ProSitePatterns Zinc finger Dof-type signature. 50 86 IPR003851 GO:0003677|GO:0006355
Gabi3266g00015 157 MobiDBLite consensus disorder prediction 23 46 - -
Gabi3266g00015 157 ProSiteProfiles Zinc finger Dof-type profile. 48 102 IPR003851 GO:0003677|GO:0006355
Gabi3266g00015 157 Pfam Dof domain, zinc finger 45 102 IPR003851 GO:0003677|GO:0006355
Gabi3266g00015 157 PANTHER CYCLIC DOF FACTOR 2 29 104 IPR045174 GO:0003700|GO:0006355
Gabi3266g00015 157 MobiDBLite consensus disorder prediction 21 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3266g00015 Gabi-Chr3266 149441 150108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3266g00015 8 157 C2C2-Dof Transcription Factor Family AT2G34140 55.357 1.46e-53 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Gabi3266g00015 zf-Dof 8.3e-32 No_clan