Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3266g00002 ATGGCAGGGGTGGTTCCCAAGAAGGCTAACAGTAACACCACCACCACCACCACCAACCCAGTTAACAAGAAGGAAAACACGAATCTTCTGTTGGGTCGGTTCGAGATTGGGAAGCTCCTCGGCCATGGAACCTTCGCCAAGGTCCACCATGCTCGGAACATCAAAACCGGTGAAGGGGTAGCCATAAAGATCATAGACAAAGAGAAGATCCTAAAGGGTGGCTTGATGTCACACATAAAGCGCGAGATCTCCATCCTCCGCCGTGTCCGCCATCCCAACATCGTGCAACTCTTCGAGGTGATGGCCACAAAGACAAAGATCTACTTCGTGATGGAGTATGTCCGTGGCGGCGAGCTCTTCAACAAGGTTGCCAAAGGAAGGTTGAAAGAACAAGTTGCAAGGAAGTACTTTCAACAGTTAGTTTCTGCCGTTGAGTTTTGCCACGCGAGAGGAGTGTTCCATAGGGATCTCAAGCCTGAAAATTTGTTACTTGACGAGAATGGTAACCTTAAAGTGTCCGATTTTGGTCTCAGTGCTGTGTCTGATCAAATTAGGCAAGATGGGTTGTTCCACACTTTTTGTGGAACACCTGCTTATGTTGCTCCTGAGGTTTTGGCTAGGAAAGGGTACGATGGTGCAAAGGTTGATATTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTGCCTTTCCATGACCACAATGTTATGGCCATGTACAAGAAGATTTACAAGGGTGAATTCAGGTGTCCTAGGTGGTTCTCTCCTGAACTCTCTGCACTTCTCAGAAGGCTTCTTGATACCAAACCCGAAACCAGGATTTCCATTCCGGAGATTATGGAGAACCGGTGGTTCAAGAAAGGGCCTGCAAGCTTGAATGCATTTGATATCATATCATTTTCTCCGGGTTTTGATCTTTCTGGGTTGTTTGAGGAAAAGGGTGATGAGGCGAGGTTTGTGTCTGGTGCCCCAGTGTCCAAGATTATATCAAAATTGGAGGAAATTGCTCAGTTGGTTAGCTTTACGGTAAGGAAAAAAGACTGCAGGGTGAGTTTGGAGGGTTCTAGAGAAGGTGTAAAGGGGCCATTGACGATTGCTGCTGAGATATTTGAATTAACACCTTCTTTGGTGGTAGTGGAGGTGAAGAAAAAAGGAGGGGATAGAGCAGAATATGAGAAATTTTGTAACTCTGAATTGAAACCTGCGTTGCAGAATTTGATGATGGAGGAATCCGCAACTTCTTCACGCCCACCTACACCCACTGAATTACCTCTTTCTGACTCTCCGCTGGACATACCTTCAGATACTGAATCTTTGTACTAA 1332 0.458 MAGVVPKKANSNTTTTTTNPVNKKENTNLLLGRFEIGKLLGHGTFAKVHHARNIKTGEGVAIKIIDKEKILKGGLMSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEQVARKYFQQLVSAVEFCHARGVFHRDLKPENLLLDENGNLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDGAKVDIWSCGVVLFVLMAGYLPFHDHNVMAMYKKIYKGEFRCPRWFSPELSALLRRLLDTKPETRISIPEIMENRWFKKGPASLNAFDIISFSPGFDLSGLFEEKGDEARFVSGAPVSKIISKLEEIAQLVSFTVRKKDCRVSLEGSREGVKGPLTIAAEIFELTPSLVVVEVKKKGGDRAEYEKFCNSELKPALQNLMMEESATSSRPPTPTELPLSDSPLDIPSDTESLY 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3266g00002 443 Gene3D Phosphorylase Kinase; domain 1 4 115 - -
Gabi3266g00002 443 CDD STKc_SnRK3 33 287 - -
Gabi3266g00002 443 MobiDBLite consensus disorder prediction 7 24 - -
Gabi3266g00002 443 CDD CIPK_C 296 407 - -
Gabi3266g00002 443 SUPERFAMILY Protein kinase-like (PK-like) 30 304 IPR011009 -
Gabi3266g00002 443 FunFam Non-specific serine/threonine protein kinase 292 410 - -
Gabi3266g00002 443 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 23 406 - -
Gabi3266g00002 443 Gene3D Kinase associated domain 1, KA1 292 411 - -
Gabi3266g00002 443 FunFam Non-specific serine/threonine protein kinase 24 306 - -
Gabi3266g00002 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Gabi3266g00002 443 Pfam Protein kinase domain 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3266g00002 443 Pfam NAF domain 292 348 IPR004041 GO:0007165
Gabi3266g00002 443 MobiDBLite consensus disorder prediction 1 24 - -
Gabi3266g00002 443 FunFam Non-specific serine/threonine protein kinase 25 113 - -
Gabi3266g00002 443 MobiDBLite consensus disorder prediction 408 443 - -
Gabi3266g00002 443 ProSiteProfiles NAF domain profile. 290 314 IPR018451 GO:0007165
Gabi3266g00002 443 Gene3D Transferase(Phosphotransferase) domain 1 116 291 - -
Gabi3266g00002 443 ProSitePatterns Protein kinases ATP-binding region signature. 40 63 IPR017441 GO:0005524
Gabi3266g00002 443 SMART serkin_6 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3266g00002 443 ProSiteProfiles Protein kinase domain profile. 34 288 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3266g00002 443 MobiDBLite consensus disorder prediction 410 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3266g00002 Gabi-Chr3266 55226 57111 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3266g00002 23 431 CBL-interacting serine-threonine protein kinases AT5G45810 68.017 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi3266g00002 Pkinase 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3266g00002 - - gmx:100807567 723.005