Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3265g00002 ATGTTTTTGTGCATGAATCCGTGTGCCAAGCCAACCCCCGTTGATGGGGATGAAGATGACCGTGGGAACGGCACGCCGAACACAAAAGAAGCCGTCAAGGGTCTCACGTCGCAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGCTGGCAATCCCAAAAGCATCAAGTATGACACCGTTTCTGAAGAGGGGGTTCCATACGGCTACATTGGTGGTGGAAGCACAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGTGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCGATGGTGGACATGACTGGATCCAACAAGTGGATAGCAAAGATGGAGCCAGGTGCTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGCTCTTTTATAATATATATTTTCCTTGTGTGGTTTATCAGCGCAAGCTTGTGA 504 0.4921 MFLCMNPCAKPTPVDGDEDDRGNGTPNTKEAVKGLTSQIKDLALKLSGKKIKAGNPKSIKYDTVSEEGVPYGYIGGGSTSSTPALDYTNPNQSPIGNTTPGVRQPQPPAGSVAMVDMTGSNKWIAKMEPGAHITVVSLPTGGNDLKRIRFCSFIIYIFLVWFISASL 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3265g00002 167 PANTHER PROTEIN BREVIS RADIX-LIKE 1 15 151 IPR044532 -
Gabi3265g00002 167 Pfam Transcription factor BRX N-terminal domain 25 48 IPR027988 -
Gabi3265g00002 167 MobiDBLite consensus disorder prediction 1 31 - -
Gabi3265g00002 167 MobiDBLite consensus disorder prediction 82 105 - -
Gabi3265g00002 167 ProSiteProfiles BRX domain profile. 121 167 IPR013591 -
Gabi3265g00002 167 MobiDBLite consensus disorder prediction 82 108 - -
Gabi3265g00002 167 Pfam Transcription factor regulating root and shoot growth via Pin3 121 150 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3265g00002 Gabi-Chr3265 46019 47063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3265g00002 1 150 Major Intrinsic Protein MIP AT1G31880 44.253 5.04e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3265g00002 - - rcu:8280074 130.568