Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3265g00001 ATGTTTTATAAGCCGCGAGCCCAGAGGTTGTGGGCTGAGAATTACGACAGGATCAGGGAGCTTCATAATATCCAGAATTTAAATCAACATGTTTTCAACACTCCTGCAAGGTCTGATGATGATGAGATTAAGGATCTGGCGCTGAAGCTTTCAGGGAAGAAAATCAAAGGTGGCACCTCCGAGAGCATCAACGCAAGTTCAACCCCTGCTTTGGACTACACAAACCCCAATCAATCCCCAATTGGTAACACCACCCCTGGAGGGCGTCAACCTCAACCACCAGCTGGTAGTGTAGCATTGGTGGACATGACTGGATCCAACGAGTGGATAGCACAGATGGAGCCAGGTGTTCACATCACCGTTGTGTCTCTTCCTACTGGGGGCAATGATCTCAAAAGGATTCGCTTCTGGGAGCTTCTTAATATACAGACTTTAAATCAACGTGTTTTCATCACTCCTGCAAGGTCTCATGATAATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACACGGATTCGACTCCGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGAATATCAAGGGCTAACAACCCTACTGACAATGACATGGATGCTGAATGGGTTGAGCAGGATGATCCTGGAGTGTCAATCACTGTGAAGAGGTCAGCTAATGGGACCAGGCAAATTCGCCGTATCAAATTCAGCCGGGAAATTTTTGATGCAGATGCAGCCAAGGATTGGTGGCTGCGCAACAGGGTTCGAGTTCATGCTCAGTATATGTGA 801 0.4757 MFYKPRAQRLWAENYDRIRELHNIQNLNQHVFNTPARSDDDEIKDLALKLSGKKIKGGTSESINASSTPALDYTNPNQSPIGNTTPGGRQPQPPAGSVALVDMTGSNEWIAQMEPGVHITVVSLPTGGNDLKRIRFWELLNIQTLNQRVFITPARSHDNENSGESEQDIPMASMLNTDSTPGNFHAPAGNMGYFHGGISRANNPTDNDMDAEWVEQDDPGVSITVKRSANGTRQIRRIKFSREIFDADAAKDWWLRNRVRVHAQYM 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3265g00001 266 MobiDBLite consensus disorder prediction 57 91 - -
Gabi3265g00001 266 Pfam Transcription factor regulating root and shoot growth via Pin3 211 265 IPR013591 -
Gabi3265g00001 266 Pfam Transcription factor regulating root and shoot growth via Pin3 107 136 IPR013591 -
Gabi3265g00001 266 MobiDBLite consensus disorder prediction 56 96 - -
Gabi3265g00001 266 ProSiteProfiles BRX domain profile. 107 161 IPR013591 -
Gabi3265g00001 266 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 46 IPR044532 -
Gabi3265g00001 266 ProSiteProfiles BRX domain profile. 211 266 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3265g00001 Gabi-Chr3265 2713 5166 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3265g00001 42 266 Major Intrinsic Protein MIP AT1G31880 35.179 4.94e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3265g00001 - - jre:109014251 165.622