Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3262g00014 ATGGCTTCTAGAGCTATTGTTCCGAATGAACAACCCAGAGGTGAGAATAACAAGCAAAAGAATGTAGCAGCAGAAGGAAGAAATAGAAGGGTACTCCAGGATATTGGCAATCTTGTGGCTAAACAAGCAGAGCCAGGTGGTGCTAATGTGTCTAAGCGCAACACAAGGAACTTTCGTTCTCAACTATTGGCTAATGGGCAAGCCGCAGCAGAGAAGAACAAGAAGTCAAGCACTGAACTTGTGAATGGCGCGGTAGTGGCTGCAGCTAATGGGGTTAGTGTGGCGAATTTCATTGCTGCAACAAAGGTGGAACAAGCTCAGAAGCCGACAGAACCTGAAGTTATTGTCATAAGCTCTGATGAGGATTGCGAGGAAAAAAAGGAGAAGAAGCAAGTTGTAAAAGGAAGAACTACAAGAGCAAGGTCCGCCATGAAAAATGCCAAGGCCTTCAGTTCAGTCCTCACGGCTAGAAGCAAGGCTGCTTGTGGACTCGCTTATAAGCCAAAGGATTTGGTAGAGAACATAGACGCAACTGATGATGACAATGAATTGGCAGCAGTAGAGTACATTGATGAAATCTATAAATATTACAAACTCACAGAAGAGGATGGTTGTGTGCATGATTACATGGGTTCACAGCCAGATGTAAATGCCAAGATGAGATCAATTCTTATGGACTGGTTGATAGAAGTGCATCGTAAATTTGAACTCATGCCAGAAACTCTCTATTTGACTATAAACATTGTGGACCGATTCCTGTCCATGAAGACTGTACCTAGAAAGGAACTTCAGCTGGTTGGCATCAGCTCAATGCTCATAGCCTCCAAATATGAAGAGATTTGGGCACCAGAGGTTAATGACTTTGTATGCATATCAGACAATGCCTATGTTAGAGAACAGGTTCTGCTCATGGAGAAAACTATCTTGGGAAATCTTGAATGGTATTTAACCGTTCCCACACCCTATGTCTTCCTGCTTCGGTATATCAAAGCCTCTACTCCCTCTGATAAGGAGATGGAAAGTATGGTGTTTTTCCTTGCTGAACTTAGTCTGATGCACTATCCCACTGTAACCTTGTACTGCCCTTCGGTGATTGCTGCTTCTGCTGTATATGCGGGACGATGTACCCTTGAAAGGAGCCCTTTCTGGACAGAGACTCTGAAGCACTACACTAGCTACTCTGAGGAACAATTAAGGGATTGTGCCAAACTCATGGTCAACCTTCATTCAGATGCTCCAGAAAGTAAGCTAAGGGCAGTTTACAAGAAATTCTGTAGCCCAGATCGTTGTGCTGTTGCTCTTCTTACTCCAGCAAAAAACTTTTCAGCACAGTCTTGA 1338 0.4372 MASRAIVPNEQPRGENNKQKNVAAEGRNRRVLQDIGNLVAKQAEPGGANVSKRNTRNFRSQLLANGQAAAEKNKKSSTELVNGAVVAAANGVSVANFIAATKVEQAQKPTEPEVIVISSDEDCEEKKEKKQVVKGRTTRARSAMKNAKAFSSVLTARSKAACGLAYKPKDLVENIDATDDDNELAAVEYIDEIYKYYKLTEEDGCVHDYMGSQPDVNAKMRSILMDWLIEVHRKFELMPETLYLTINIVDRFLSMKTVPRKELQLVGISSMLIASKYEEIWAPEVNDFVCISDNAYVREQVLLMEKTILGNLEWYLTVPTPYVFLLRYIKASTPSDKEMESMVFFLAELSLMHYPTVTLYCPSVIAASAVYAGRCTLERSPFWTETLKHYTSYSEEQLRDCAKLMVNLHSDAPESKLRAVYKKFCSPDRCAVALLTPAKNFSAQS 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3262g00014 445 PIRSF Cyclin_A_B_D_E 2 445 IPR046965 GO:0016538|GO:0044772
Gabi3262g00014 445 PANTHER CYCLINS 143 423 IPR039361 -
Gabi3262g00014 445 SUPERFAMILY Cyclin-like 181 316 IPR036915 -
Gabi3262g00014 445 SUPERFAMILY Cyclin-like 320 439 IPR036915 -
Gabi3262g00014 445 MobiDBLite consensus disorder prediction 1 29 - -
Gabi3262g00014 445 Gene3D - 206 317 - -
Gabi3262g00014 445 SMART cyclin_7 226 310 IPR013763 -
Gabi3262g00014 445 SMART cyclin_7 323 407 IPR013763 -
Gabi3262g00014 445 Pfam Cyclin, C-terminal domain 319 436 IPR004367 -
Gabi3262g00014 445 CDD CYCLIN_AtCycB-like_rpt1 169 314 - -
Gabi3262g00014 445 CDD CYCLIN_AtCycB-like_rpt2 319 437 - -
Gabi3262g00014 445 Gene3D - 192 433 - -
Gabi3262g00014 445 SMART Cyclin_C_2 319 438 IPR004367 -
Gabi3262g00014 445 FunFam G2/mitotic-specific cyclin-1 313 433 - -
Gabi3262g00014 445 FunFam G2/mitotic-specific cyclin 205 312 - -
Gabi3262g00014 445 Pfam Cyclin, N-terminal domain 192 316 IPR006671 -
Gabi3262g00014 445 ProSitePatterns Cyclins signature. 221 252 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3262g00014 Gabi-Chr3262 167956 170849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3262g00014 1 442 Core Cell Cycle Gene Families AT2G26760 51.011 1.13e-149 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3262g00014 K21777 - gmx:547782 633.254