Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3260g00005 ATGAGTTCAAAATATGATTTTCTGAAGGATGTTAATCCTGCCAAAGAGGACTGGAGGATTAAGGTGAAGGTGGTTCGGACTTGGAAAGTTCCTAACTTTCAGCGTAAAAATTTGGAGGACAATCTTGAAATGGTTTTATTGGATGAACAGGGTGGTAGGATCCACACCACTGTCAAAGACGTCATTGGTTTAATATCAAGAATTGGGAAAGTTTGTGATCGTGTGGTTTCTGGTAGGAAGACAAAAATGGTGGTGTTGGAGCTTGACGACCTGAGGGGTCATAAGTTGGAGTGCACTTTGTGGGAGCATTATGTGGATGAGGTCCAATCTTTTTTGGCAGACAACGACGATCCTCATAACGTCCTGATAGTCCAATTGGGAAGGATTAAGTGTTTTAGAGGTAAGGTCGGGATAACAAATACAAAATATACAACAAGGATTGTAATGGATTCAAAACTGAATGAGATTGTTGAGTTCAAAAAATGTCTCTCGATTGATGGTGTGGAAAGTAGTACAAGGATGACTCAATTGTCTACTCAGTCATCCTATTCTTTCGAAAATGATTTTCTTAAGGAGACTGAAAAAAAGTCTATCAGTGATGTGAAACTTTGTGTTGAGGTAACTACCTGCATCACATACGGGACTATAAAGGCAATTGAGAGCAAATACAACTGGTGGTACAAGTCATGCAAAAAGTGTCCATTTTCCGTTTATGAGGATTTTGAGAAGTGGTATTATTCCGCATCCTTTATTCTGTTTGATCGCGACTGTGTGTCTTTGTTGGGAATGAGTGCTGCTGAATTGCGCGAGCTGCATTTCAAGAGGGGTGCCGATTTGGATCAATTTCCAAATGAGTTAAATGTTCTGAATGAAAAGTCAATGTTGTTCAAGATAAAAGTTAAGCAAAAGGATTTGAACACAAATAGTGAGCCCAAATATCAAGTTGTAACCTCAGCGTTCATTAAGTCTCTTATAGATCCAAATGATGAAGCAAATTTCGATAATGCACGCGAAAATGAAGTTGTTTCGCCGGAACTGGAAAAGGTTGCG 1050 0.3924 MSSKYDFLKDVNPAKEDWRIKVKVVRTWKVPNFQRKNLEDNLEMVLLDEQGGRIHTTVKDVIGLISRIGKVCDRVVSGRKTKMVVLELDDLRGHKLECTLWEHYVDEVQSFLADNDDPHNVLIVQLGRIKCFRGKVGITNTKYTTRIVMDSKLNEIVEFKKCLSIDGVESSTRMTQLSTQSSYSFENDFLKETEKKSISDVKLCVEVTTCITYGTIKAIESKYNWWYKSCKKCPFSVYEDFEKWYYSASFILFDRDCVSLLGMSAAELRELHFKRGADLDQFPNELNVLNEKSMLFKIKVKQKDLNTNSEPKYQVVTSAFIKSLIDPNDEANFDNARENEVVSPELEKVA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3260g00005 350 PANTHER OS03G0429900 PROTEIN 8 314 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gabi3260g00005 350 SUPERFAMILY Nucleic acid-binding proteins 6 59 IPR012340 -
Gabi3260g00005 350 SUPERFAMILY Nucleic acid-binding proteins 57 168 IPR012340 -
Gabi3260g00005 350 CDD RPA1_DBD_B_like 60 161 - -
Gabi3260g00005 350 Gene3D - 24 172 IPR012340 -
Gabi3260g00005 350 Gene3D - 245 326 IPR012340 -
Gabi3260g00005 350 SUPERFAMILY Nucleic acid-binding proteins 208 321 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3260g00005 Gabi-Chr3260 47386 49629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3260g00005 39 307 Core DNA Replication Machinery Family AT5G08020 22.403 1.14e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3260g00005 - - aip:107636694 173.326