Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3259g00030 ATGAAGTTCGCCATTCTTACATTCTTCTTTGTCCTTCCCATTGCATTTGCTAAACTAGAGATTGGATTCTATGCCCCAACCTGCCCAACAGCAGAGGAAATTGTTCATCAAGTGGTTCAGAGGAATTTCAAAAGTCAAAAATTCATTACAGGAGCCCTGCTTCGAATGCACTTCCATGACTGTTTTGTCAGAGGTTGTGATGCCTCAATATTAATAGACCCAACACAGGGCAACAAATCAGAGAAAGATGCACCTGCAAACAAAAGCGTAAGGGGATATGAACTCATTGATGAAATAAAGACAGCCTTGGAAAAAGAATGTCCTTCAACGGTTTCATGTGCTGATATCATAACACTTGCAACAAGAGATGCTGTGGCTATGGCCGGAGGACCAAGATACAGTGTTCTCACTGGTAGGCGTGATGGGCTGGTATCAAATCCTTCTGAAGTGAACCTTCCATCGCCAGGTTCTACAGTGCCAGAGGCATTGAAATCTTTTGTCGAAAAGAACATGACACTGAGTGAAATGATTACCCTTTTGGGAGCACACACTGTTGGTTCTTCTCACTGTAGTTTCATTCAAATGAGACTCTCCGTTCTTCCAATAGATCCTGTTTTGCGTGCTAAGCTCGTGCAGATATGTGGGTCAGCCAAGGATCACACGGTGTTTTTGGATCAAAACACTTCTTTTGTGTTTGACAACGAGTTCTACAACCAAATCCTTTTGAAAAAAGGAGTGCTTTTCATTGATCAACAACTTGCTTTGGATCCTTCCTCCAGTGGCTTAGTCTCAGCTCTTGCGCAAAATGATGCAGATTTTCAGCAAAGCTTTGCGGATGCTATAATAAAGATGGGAAGCATTGATGTTTTGGTTGGAAAAGATGGAGAGATTAGAAAAAACTGCAGGGTTTTTAATAGTGATTCGTAG 927 0.4186 MKFAILTFFFVLPIAFAKLEIGFYAPTCPTAEEIVHQVVQRNFKSQKFITGALLRMHFHDCFVRGCDASILIDPTQGNKSEKDAPANKSVRGYELIDEIKTALEKECPSTVSCADIITLATRDAVAMAGGPRYSVLTGRRDGLVSNPSEVNLPSPGSTVPEALKSFVEKNMTLSEMITLLGAHTVGSSHCSFIQMRLSVLPIDPVLRAKLVQICGSAKDHTVFLDQNTSFVFDNEFYNQILLKKGVLFIDQQLALDPSSSGLVSALAQNDADFQQSFADAIIKMGSIDVLVGKDGEIRKNCRVFNSDS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3259g00030 308 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Haem peroxidase superfamily signature 225 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 FunFam Peroxidase 153 284 - -
Gabi3259g00030 308 CDD secretory_peroxidase 18 304 IPR033905 GO:0004601|GO:0042744
Gabi3259g00030 308 ProSiteProfiles Plant heme peroxidase family profile. 18 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 Pfam Peroxidase 36 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 239 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 279 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 PRINTS Plant peroxidase signature 223 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Gabi3259g00030 308 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Gabi3259g00030 308 FunFam Peroxidase 22 162 - -
Gabi3259g00030 308 Gene3D - 22 305 - -
Gabi3259g00030 308 Gene3D Peroxidase, domain 2 153 284 - -
Gabi3259g00030 308 PANTHER - 7 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00030 308 SUPERFAMILY Heme-dependent peroxidases 19 305 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3259g00030 Gabi-Chr3259 491718 493082 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3259g00030 8 306 Peroxidase AT4G26010 56.000 3.34e-122 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3259g00030 K00430 - dcr:108224440 394.815