Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3259g00028 ATGAAGACTTCGATCATCCTAATGCTCTCTTTCTTCTATGTACTTCCCTTAGCCTATGCTGACCTACTGGTTGGTTTCTATGGTTCAACCTGTCCGAAAGCAGAGACAATTATTCAGCAAGCGGTGGAGAAGCTATTCAATCACGACAAGTCCATAACTGCAGCCTTGGTTCGCTTGCAGTTCCATGACTGTTTTGTTAGAGGATGCGATGCATCAATACTTATAGATTCCAGGAATGGAAAGCTATCGGAGAAAGATGCGTTTGACAGCATCTTCCTTAGAGGGTTTCATTTGATTGATGAGATCAAAGAAAGCTTAGAAGCCTTATGCCCTTCCACAGTTTCATGTGCTGATATTGTAAGTATTGCTGCTAGAGATGCTGTGGACTTAGCAGGAGGACCTGAATATCAAGTTCCCACAGGGAGGCGTGATGGGCTTGTTTCAAATCTTGAAGATGTGAAGATGCCACAGCCTAATGATCATGTAAATGTGTCTCTGCAAATTTTCAATGAGAAGGGGTTAACATTAAATGATATGGTGACCCTTTTGGGTGCACACACGGTCGGTGTTGCTCATTGTGGTTTCTTCGCTAGTAGGCTTGTGGGAAACCAATCTGACCCTAATATGGATCCTGCTCTGCGAGCTAAGCTGATCAAACTATGTTTTAAAGCTTCGAGAAGAGAACCCTCTGCATTTTTGGATCAAAACACATCGTTTGTGTTTGATAACGAATTTTACCATCAAATCCTTGAAAAGAGAGGCATATTGCTAATAGATGAGCAGCTTGCTTTTGATAATTCCACCAGCGGTATTGTTAGAAATTTTGCATCGGACAACGTGGGATTTCTGCAGAGCTTTGCAAAAGCTATGATAAAAATGGGCAGCATCGAAGTTCTGGGTGGAAATGAGGGTGAGATACGAAAAAACTGTAGGTATTGA 939 0.4207 MKTSIILMLSFFYVLPLAYADLLVGFYGSTCPKAETIIQQAVEKLFNHDKSITAALVRLQFHDCFVRGCDASILIDSRNGKLSEKDAFDSIFLRGFHLIDEIKESLEALCPSTVSCADIVSIAARDAVDLAGGPEYQVPTGRRDGLVSNLEDVKMPQPNDHVNVSLQIFNEKGLTLNDMVTLLGAHTVGVAHCGFFASRLVGNQSDPNMDPALRAKLIKLCFKASRREPSAFLDQNTSFVFDNEFYHQILEKRGILLIDEQLAFDNSTSGIVRNFASDNVGFLQSFAKAMIKMGSIEVLGGNEGEIRKNCRY 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3259g00028 312 PANTHER PEROXIDASE 25-RELATED 12 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Haem peroxidase superfamily signature 234 249 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 Pfam Peroxidase 39 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Gabi3259g00028 312 FunFam Peroxidase 156 293 - -
Gabi3259g00028 312 Gene3D - 25 311 - -
Gabi3259g00028 312 CDD secretory_peroxidase 22 311 IPR033905 GO:0004601|GO:0042744
Gabi3259g00028 312 FunFam Peroxidase 25 167 - -
Gabi3259g00028 312 PRINTS Plant peroxidase signature 288 301 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Plant peroxidase signature 248 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Plant peroxidase signature 232 247 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Gabi3259g00028 312 ProSiteProfiles Plant heme peroxidase family profile. 21 312 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 SUPERFAMILY Heme-dependent peroxidases 22 311 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00028 312 Gene3D Peroxidase, domain 2 156 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3259g00028 Gabi-Chr3259 374469 382416 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3259g00028 1 311 Peroxidase AT4G26010 53.205 1.02e-117 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3259g00028 K00430 - gmx:100777946 380.178