Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3259g00027 ATGAAGTTCACCATTCTTACCTTCTTCTTTATCCTTCCCATTGTATTTGCTAAGCTCAAGATTGGATTCTACACCCCAACTTGCCCAACAGCAGAGGATATTGTTCGTCGAGTGGTTCAGAATAATTTCAAAAGTCAAAAATTCATTTCCGGTGCCCTGCTTCGAATGCACTTCCATGATTGTTTTGTCAGGGGCTGTGATGCCTCAATATTAATAGATTCAAGACGGGGAAATAAATCAGAGAAAGATGCACAAGCAAACACAAGCGTTAGGGGATATGAGCTCATTGATGAAATAAAAGAAGCCTTGGAAGAAGAATGTCCTTCAACGGTTTCATGTGCTGATATCATAGCACTTGCAACAAGAGATGCTGTGGCCTTAGCTGGAGGACCAAGATACAGTGTTCTCACTGGTAGGCGTGATGGGTTGGTATCAAATCCTTCTGAAGTGAACCTTCCATCGCCAGATTCTACAGTGCCAGAGGCATTGAAATCTTTCGTGGAAAAGAACATGACACTGATTGAAATGATTACCCTTTTGGGAGCACATACCATTGGTTCTACTCACTGCAATTTCATTCAAACGAGGCTCACTTCTCTTCCAATTGAACCTTCTTTGCGTGATCAGCTTTCGCATATATGTGGGAAACAAAATGATCAACAACATGACCCATCTCTGTTTTTGGATCAAGGAACACCTTTTGTGTTTGATAACCATTTCTATAAGGAAATCGTTGCGAGGAGAGGGGTGCTTTTCATTGATCAGGATCTTGCTTTGAATCCTCAATCGAGTGGCCCTGTCACTTTTCTTGCGGGAAATGCTAAGGTTTTTGAAAGTAGCTTTGTTGAAGCTATAGTAAAGACGGGGAACATTGGTGTCTTGGAAGGAAACGGGGGAGAGATTAGAAGAAACTGCAGGGTCTTTAATTAA 930 0.4172 MKFTILTFFFILPIVFAKLKIGFYTPTCPTAEDIVRRVVQNNFKSQKFISGALLRMHFHDCFVRGCDASILIDSRRGNKSEKDAQANTSVRGYELIDEIKEALEEECPSTVSCADIIALATRDAVALAGGPRYSVLTGRRDGLVSNPSEVNLPSPDSTVPEALKSFVEKNMTLIEMITLLGAHTIGSTHCNFIQTRLTSLPIEPSLRDQLSHICGKQNDQQHDPSLFLDQGTPFVFDNHFYKEIVARRGVLFIDQDLALNPQSSGPVTFLAGNAKVFESSFVEAIVKTGNIGVLEGNGGEIRRNCRVFN 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3259g00027 309 CDD secretory_peroxidase 18 308 IPR033905 GO:0004601|GO:0042744
Gabi3259g00027 309 Gene3D Peroxidase, domain 2 153 288 - -
Gabi3259g00027 309 FunFam Peroxidase 153 288 - -
Gabi3259g00027 309 SUPERFAMILY Heme-dependent peroxidases 19 309 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Gabi3259g00027 309 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Gabi3259g00027 309 PRINTS Plant peroxidase signature 283 296 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Plant peroxidase signature 227 242 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Plant peroxidase signature 243 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Haem peroxidase superfamily signature 229 244 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 Gene3D - 22 309 - -
Gabi3259g00027 309 FunFam Peroxidase 22 163 - -
Gabi3259g00027 309 PANTHER - 7 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 ProSiteProfiles Plant heme peroxidase family profile. 18 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00027 309 Pfam Peroxidase 35 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3259g00027 Gabi-Chr3259 370497 371535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3259g00027 8 309 Peroxidase AT4G26010 54.455 2.01e-114 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3259g00027 K00430 - gmx:100820340 372.474