Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3259g00026 ATGGAAGATCAGGGCCAGCATGACCCCAATAGTCCAAGCCATGGTTCCGAGAAAAGCGAACCGGTTAGGTCAAGGTGGACTCCAAAGCCAGAACAAATCCTCATACTCGAGTCCATCTTCAACAGTGGAATGGTGAATCCACCAAAGGAAGAAACCGTCAGAATAAGAAAACTGCTTGAGAAATTTGGCACCGTCGGTGATGCCAACGTCTTCTACTGGTTCCAGAACCGACGCTCGAGATCTCGCCGCCGGCAGCGCCAGCTTCAGGCAAGCCTTGAGCAAAGTAACCAGATGCAACCTCAAGTTGGTGGTGCAATTCCATGTGATCAGAATCAGACAACCTTTCCTGCAAACACAACCATGGGTTTTGGTTCTGGTTCTGGTTATTCTTCTTCTTTCACTTGTTCTTCTCAATGTTTTCTACCTGGTTCCTCTTCATCATGCGGTGTCGTTTGTAGCCAAGAAAACATGGATGGTTTCTTTTCAGTCTCTCCTCAAATGGGTTTCCCAGAAATTGATCATAGCTCAGCTGCATCATCAGTTTTGTACCCTTCTGTTACTTCAAATTTGAACTATGAATCTGGATTCATTACTGTATTTATCAATGGGATTGCAACAGAACTACCAAAGGGGCCAATAGACATTAAAACAGTGTTTGGAGATGTAATGTTAGTTCATTCCTCTGGAGTGCCACTTCCCACCAACGAATTCGGGTTCTTGATGCAGAGCTTGCAGCACGGTGAAAGCTACTTTCTGGTTGGCACATAG 768 0.4544 MEDQGQHDPNSPSHGSEKSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETVRIRKLLEKFGTVGDANVFYWFQNRRSRSRRRQRQLQASLEQSNQMQPQVGGAIPCDQNQTTFPANTTMGFGSGSGYSSSFTCSSQCFLPGSSSSCGVVCSQENMDGFFSVSPQMGFPEIDHSSAASSVLYPSVTSNLNYESGFITVFINGIATELPKGPIDIKTVFGDVMLVHSSGVPLPTNEFGFLMQSLQHGESYFLVGT 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3259g00026 255 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Gabi3259g00026 255 MobiDBLite consensus disorder prediction 1 26 - -
Gabi3259g00026 255 FunFam WUSCHEL-related homeobox 11 23 90 - -
Gabi3259g00026 255 SMART HOX_1 21 88 IPR001356 GO:0003677
Gabi3259g00026 255 Gene3D - 23 90 - -
Gabi3259g00026 255 SUPERFAMILY Homeodomain-like 15 90 IPR009057 -
Gabi3259g00026 255 Pfam Homeodomain 23 83 IPR001356 GO:0003677
Gabi3259g00026 255 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 253 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3259g00026 Gabi-Chr3259 340530 342142 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3259g00026 10 253 Wox Gene Family AT5G17810 52.593 2.08e-73 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gabi3259g00026 Homeodomain 4.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3259g00026 - - lang:109335690 313.923