Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3259g00024 ATGAAGTTCGCCATTCTTACATTCTTTTTTGTCCTTCCCATTGCATTTGCTAAACTCGAGATTGGATTCTATGCCCCAACCTGCCCAACAGCAGAGGAAATTGTTCATCAAGTGGTTCAAAGGAATTTCAAAAGTCAAAAAAACATTACAGGAGCCCTGCTTCGAATGCACTTTCATGACTGTTTTGTCAGAGGTTGTGATGCCTCAATATTAATAGACCCAACAGAGGGCAACAAATCAGAGAAAGATGCACCTGCAAATAAAAGCGTAAGGGGATATGAACTTATTGATGAAATAAAGAAAGCCTTGGAAAAAGAATGCCCTTCAACGGTTTCATGTGCTGATATCATAACACTTGCAACAAGAGATGTTGTGGCTATGGCCGGAGGACCAAGATATAGTGTTCTCACTGGTAGGCGTGATGGGTTGGTATCCAATTCTTCTGAAGTGAACATTCTAGGACCAGATTCTACAGTGCCAGAGGCATTGAAATCTTTTGTCGAAAAGAACATGACACTGAGTGAAATGATTACCCTTTTGGGAGCACACACTGTTGGTTCTGCTCACTGCAATTTCATTCAAACGAGACTCTCTATTCTTCCAATAGATCCTGTTTTGCATGCTAAGCTCATGCAGATATGTGGGCCAGCCAATACAAGCAAGGATCACACAGTGTTTTTGGATCAAAACACTTCTTTTGTGTTTGACAACGAGTTCTACAACCAAATCCTTTTGAAAAGAGGGGTGCTTTTCATTGATCAGCAACTTGCTTTGGATCCTTCCTCGAGTGGCTTAGTCTCAACTCTTGCTCAAAATGATGCAGATTTTCAGCAAAGCTTTGCGGATGCTATAATAAAGATGGGAAGCATTGATGTTTTGGTTGGAAAAGATGGAGAGATTAGAAAAAACTGCAGGGTTTTTAATAGTGGTTAA 933 0.4051 MKFAILTFFFVLPIAFAKLEIGFYAPTCPTAEEIVHQVVQRNFKSQKNITGALLRMHFHDCFVRGCDASILIDPTEGNKSEKDAPANKSVRGYELIDEIKKALEKECPSTVSCADIITLATRDVVAMAGGPRYSVLTGRRDGLVSNSSEVNILGPDSTVPEALKSFVEKNMTLSEMITLLGAHTVGSAHCNFIQTRLSILPIDPVLHAKLMQICGPANTSKDHTVFLDQNTSFVFDNEFYNQILLKRGVLFIDQQLALDPSSSGLVSTLAQNDADFQQSFADAIIKMGSIDVLVGKDGEIRKNCRVFNSG 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3259g00024 310 PRINTS Haem peroxidase superfamily signature 111 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Haem peroxidase superfamily signature 129 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Haem peroxidase superfamily signature 50 64 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Haem peroxidase superfamily signature 175 190 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 FunFam Peroxidase 153 287 - -
Gabi3259g00024 310 FunFam Peroxidase 22 161 - -
Gabi3259g00024 310 SUPERFAMILY Heme-dependent peroxidases 19 308 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 ProSiteProfiles Plant heme peroxidase family profile. 18 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 ProSitePatterns Peroxidases proximal heme-ligand signature. 175 185 IPR019793 -
Gabi3259g00024 310 ProSitePatterns Peroxidases active site signature. 50 61 IPR019794 GO:0004601
Gabi3259g00024 310 CDD secretory_peroxidase 18 307 IPR033905 GO:0004601|GO:0042744
Gabi3259g00024 310 Gene3D Peroxidase, domain 2 153 287 - -
Gabi3259g00024 310 Pfam Peroxidase 35 272 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 Gene3D - 22 308 - -
Gabi3259g00024 310 PANTHER - 7 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 52 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 91 104 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 28 47 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 110 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi3259g00024 310 PRINTS Plant peroxidase signature 174 186 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3259g00024 Gabi-Chr3259 294007 295044 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3259g00024 8 309 Peroxidase AT4G26010 55.116 3.98e-119 344
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3259g00024 K00430 - dcr:108224440 392.889