Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3256g00003 ATGGATTTGGACAACGGAAATGGAGCAGAACATAGCTGTCTAGAAGAGAGTATAAGTATAGTTGATGGAATTGAAGTTCAAGAGCCATATGTGGGAATGGAATTTGACTCTGAAGAAACTGCCAGGAAATTTTATGTTGAATATGCTAGACGGGTAGGATTTGTTGTACGCATTATGCAACGTCGACGTTCGGGAATTGATGGGAGGACTCTTGCTCGCCGACTTGGATGTAACAAACAAGGATTCTCCCCAAATAACAAGGGAACGTTTGGGCCAGAGAAAAAGCCTAGACTAAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTGGTGAAATTGGAAAAATCTGGAAAATGGGTTGTTACAAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGGTTTAGCTCAGAGGGTGATAAAGATAAGAAGATTGAAGAACTTACTGTGGAGTTAGAGCGCCAAGACCAACTATGTGCTGCATATCGAGAAAAACTACTCAGCTTCATAAACAATGTTGAGGAACAAACAGAGGAACTGTCCACAAAAATTCAACTCATCATTGAAAGTATAAGGAGAGCTGAGTCAGAAATGCAAAACTTTTCCCAGAACAGAAAGCCTTTGTGGTTATCCAAAGTGTATAAATGA 657 0.4018 MDLDNGNGAEHSCLEESISIVDGIEVQEPYVGMEFDSEETARKFYVEYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNKGTFGPEKKPRLSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFSSEGDKDKKIEELTVELERQDQLCAAYREKLLSFINNVEEQTEELSTKIQLIIESIRRAESEMQNFSQNRKPLWLSKVYK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3256g00003 218 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
Gabi3256g00003 218 Coils Coil 148 168 - -
Gabi3256g00003 218 Coils Coil 187 207 - -
Gabi3256g00003 218 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 8 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3256g00003 Gabi-Chr3256 6757 13713 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3256g00003 FAR1 8.9e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3256g00003 - - vun:114183030 357.451