Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3256g00002 ATGGATCTTGTGGTAGTGGATTTGGACAACGGAAATGGAGCAGAACATAGCTGTCTAGAAGAGAGTATAAGTATAGTTGATGGAATTGAAGTTCAAGAGCCATATGTGGGAATGGAATTTGACTCTGAAGAAACTGCCAGGAAATTTTATGTTGAATATGCTAGACGGGTAGGATTTGTTGTACGCATTATGCAACGTCGACGTTCGGGAATTGATGGGAGGACTCTTGCTCGCCGACTTGGATGTAACAAACAAGGATTCTCCCCAAATAACAAGGGAACGTTTGGGCCAGAGAAAAAGCCTAGACTAAGTGCCCGAGAAGGTTGCAAGGCAACAATTTTGGTGAAATTGGAAAAATCTGGAAAATGGGTTGTTACAAGATTTATAAAGGATCACAACCATCCTCTAATTGCTACAGCTAATGGGTTTAGCTCAGAGGGTGATAAAGATAAGAAGATTGAAGAACTTACTGTGGAGTTAGAGCGCCAAGACCAACTATGTGCTGCATATCGAGAAAAACTACTCAGCTTCATAAACAATGTTGAGGAACAAACAGAGGAACTGTCCACAAAAATTCAACTCATCATTGAAAGTATAAGGAGAGCTGAGTCAGAAATGCAAAACTTTTCCCAGAACAGAAAGCCTTTGTGGTTATCCAAAGTGTATAAATGA 672 0.4033 MDLVVVDLDNGNGAEHSCLEESISIVDGIEVQEPYVGMEFDSEETARKFYVEYARRVGFVVRIMQRRRSGIDGRTLARRLGCNKQGFSPNNKGTFGPEKKPRLSAREGCKATILVKLEKSGKWVVTRFIKDHNHPLIATANGFSSEGDKDKKIEELTVELERQDQLCAAYREKLLSFINNVEEQTEELSTKIQLIIESIRRAESEMQNFSQNRKPLWLSKVYK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3256g00002 223 Coils Coil 153 173 - -
Gabi3256g00002 223 Pfam FAR1 DNA-binding domain 48 137 IPR004330 -
Gabi3256g00002 223 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 11 200 - -
Gabi3256g00002 223 Coils Coil 192 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3256g00002 Gabi-Chr3256 6757 13719 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3256g00002 FAR1 9.3e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3256g00002 - - vun:114183030 365.925