Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3250g00002 TTCTCTGTGGCTTCAAGTGAGTTCCAAGTTGGAGACACAAAAGGGTGGGTTGTTCCACCAGCCAATGACACAAACATGTACAATGATTGGGCCTCACACAACAGGTTCCATGTTGGTGACACCATTTATTTTAGGTACAAGAAGGACTCTGTGATGGAGGTCGGTGAGGAAGATTACAAGGATTGCAATGCCACTCACCCAACTTTCTTTTCCAACATTGGAAACACTGTGTTCAGGTTTGAACACTCAGGGACTTTCTACTTCGTAAGTGGTGCATCAGGGCATTGTGAGAAGGGACAGAAGATGATTGAGAGGGTGATGGTTCCAGATGAGTCTCTTTCTCAGCATGCAAAGTCTTCTGGGCACCATGATCCTGTTTTGTCAATTGGGGTGTCTCAAATGATCTTCCTTCAGTTTGTTTTTGCATGTGTTGCTTCCTATGTAATTTGA 450 0.4422 FSVASSEFQVGDTKGWVVPPANDTNMYNDWASHNRFHVGDTIYFRYKKDSVMEVGEEDYKDCNATHPTFFSNIGNTVFRFEHSGTFYFVSGASGHCEKGQKMIERVMVPDESLSQHAKSSGHHDPVLSIGVSQMIFLQFVFACVASYVI 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3250g00002 149 PANTHER BLUE COPPER PROTEIN 7 108 IPR039391 GO:0009055
Gabi3250g00002 149 CDD OsENODL1_like 7 107 IPR041846 -
Gabi3250g00002 149 Gene3D - 5 110 IPR008972 -
Gabi3250g00002 149 FunFam Early nodulin-like protein 1 5 111 - -
Gabi3250g00002 149 Pfam Plastocyanin-like domain 25 100 IPR003245 GO:0009055
Gabi3250g00002 149 ProSiteProfiles Phytocyanin domain profile. 6 108 IPR003245 GO:0009055
Gabi3250g00002 149 SUPERFAMILY Cupredoxins 6 105 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3250g00002 Gabi-Chr3250 42195 42786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3250g00002 2 121 Phytocyanin Superfamily AT5G14345 54.167 6.48e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3250g00002 - - gmx:100815728 248.44