Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3250g00001 ATGAGTGTGCATCTTTCACCAAAAAAAAAAAACTCTGTGCACTTATTCTCCTCTTGCCTTCTCTCATACTTGCAATGGCTTGTTCTTCTTCCTCCATGGGGTCTACTTGTGTTTCTCTTAGCCATTTTCTCTGTTCCACAATGTTTCTCTGTGGCTTCAAGTGAGTTCCAAGTCGGAGACACAAAAGGGTGGGTTGTTCCACCAGCCAATGACACAAACATGTACAATGATTGGGCCTCACACAACAGGTTCCATGTTGGTGACACCATTTATTTTAGGTACAAGAAGGACTCTGTGATGGAGATCGGTGAGGAAGATTACAAGGATTGCAATGCCACTCACCCAACTTTCTTTTCCAACATTGGAAACACTGTGTTCAGGTTTGAACACTCGAGGACTTTCTACTTCATAAGTGGTGCATCAGGGCATTGTGAGAAGGGACAGAAGATGATTGTGAGGGTGATGGTTCCAGATGAGTCTCTTTCTCAGCATGCAAAGTCTTCTGGGCACCATGATCCTGTTTTGCCAATTGGGGTGTCTCAAATGATCTTCCTTCAGTTTGTTTTTGCATGTGTTGCTTCCTAT 585 0.4359 MSVHLSPKKKNSVHLFSSCLLSYLQWLVLLPPWGLLVFLLAIFSVPQCFSVASSEFQVGDTKGWVVPPANDTNMYNDWASHNRFHVGDTIYFRYKKDSVMEIGEEDYKDCNATHPTFFSNIGNTVFRFEHSRTFYFISGASGHCEKGQKMIVRVMVPDESLSQHAKSSGHHDPVLPIGVSQMIFLQFVFACVASY 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3250g00001 195 ProSiteProfiles Phytocyanin domain profile. 54 156 IPR003245 GO:0009055
Gabi3250g00001 195 SUPERFAMILY Cupredoxins 54 155 IPR008972 -
Gabi3250g00001 195 CDD OsENODL1_like 55 155 IPR041846 -
Gabi3250g00001 195 Pfam Plastocyanin-like domain 73 148 IPR003245 GO:0009055
Gabi3250g00001 195 PANTHER BLUE COPPER PROTEIN 51 160 IPR039391 GO:0009055
Gabi3250g00001 195 FunFam Early nodulin-like protein 1 53 159 - -
Gabi3250g00001 195 Gene3D - 53 158 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3250g00001 Gabi-Chr3250 150 1631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3250g00001 37 165 Phytocyanin Superfamily AT5G14345 52.713 8.89e-45 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3250g00001 - - gmx:100815728 255.373