Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi324g00015 ATGGGCCCAAGCAGCTTTCTATGGAATTTTACTAAAAAGTTCGTCACAGCTGGGCTCGTTACTCTGACTGTGTCTGATCGTTATGCGAGCGTTGTTCCGGTTCGAGGTGCCTCGATGTCTCCCACATTTAATCCTAAAACTGGTTCTTTGATGAGAGATTTTTCTGATGACTATGTCTTGGTTGAGAAAATTTGCCTTCAGGAGTACAAGTTTTCACATGGAGATGTGGTGGTCTTCTGCTCCCCATTGAATCACAAGGAGAGACACATAAAAAGAATAGTTGCATTACCTGGTGAATGGTTTGGCACCCGTCATAACCATGATGTGCTGAAGATTCCAGAAGGACATTGTTGGGTTGAGGGAGACAATGCAGCTACTAGCGAGGATTCAAACTCATTTGGACCTATTCCCTTGGGTCTAGTTCGAGGAAGGGTGACCCATGTTGTGTGGCCTCTTCAAAGAATAGGAGCTGTCAAAAGTACTCCACCAGAAAGATTATCATTATAG 507 0.4418 MGPSSFLWNFTKKFVTAGLVTLTVSDRYASVVPVRGASMSPTFNPKTGSLMRDFSDDYVLVEKICLQEYKFSHGDVVVFCSPLNHKERHIKRIVALPGEWFGTRHNHDVLKIPEGHCWVEGDNAATSEDSNSFGPIPLGLVRGRVTHVVWPLQRIGAVKSTPPERLSL 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi324g00015 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 27 43 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gabi324g00015 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 89 101 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gabi324g00015 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 112 131 IPR000223 GO:0006508|GO:0008236|GO:0016020
Gabi324g00015 168 Pfam Signal peptidase, peptidase S26 8 99 IPR019533 GO:0004252|GO:0006465
Gabi324g00015 168 Pfam Signal peptidase, peptidase S26 108 150 IPR019533 GO:0004252|GO:0006465
Gabi324g00015 168 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 1 164 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Gabi324g00015 168 FunFam Mitochondrial inner membrane protease subunit 25 163 - -
Gabi324g00015 168 SUPERFAMILY LexA/Signal peptidase 30 158 IPR036286 -
Gabi324g00015 168 CDD S26_SPase_I 30 145 IPR019533 GO:0004252|GO:0006465
Gabi324g00015 168 Gene3D Umud Fragment, subunit A 27 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi324g00015 Gabi-Chr324 109405 112688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi324g00015 39 162 MADS-box Gene Family AT1G29960 35.385 3.17e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi324g00015 K09648 - gmx:100527429 283.878