Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi324g00006 ATGGAAGGTGCAAAGGTTGCAAATGGAAACGGCTCATTGAACTTGAAGCCAAGTGAGACTAAGGGAAAGATCATTACTTGCAAAGCTGCTGTGGCATATGGTCCGGGAGAACCCCTCGTGGTGGAACAAGTTCTTGTTCATCCACCTCAGAAAATGGAGGTTCGAATCAAGATTCTCTATACTTCTATTTGTCACACCGATCTCAGTGCTTGGCGAGGCGAGAATGAGTCTCAGCGTGCTTTTCCACGAATTTTTGGCCATGAAGCTTCCGGGGTTGTGGAGAGCGTTGGGGAAGGTGTGAGTGACATGGAAGAAGGGGACATGGTGGTGCTGATATTCAATGGGGAGTGCGGTGAGTGTAGCTACTGCAAGTGCGAGTTAACAAACATGTGTGAGAGGTTTGGTGTGAACCCAATGAAGAAAGTTATGGCTGGTGATGGCACATGCAGATTCTCAACCATTAACGGCAAACCCATCTTCCATTTCTTGAACACCTCAACCTTCACGGAGTACACGGTGGTTGACTCAGCCTGCGTCGTTAAGCTCCACCGTGACCTCACCCTTAACCTCAAAAACCTCACCTTGCTCAGCTGCGGTGTATCCACAGGAGTTGGAGCTGCTTGGAATACTGCTAATGTACATTCAGGTTCATCTGTGGCAGTCTTTGGTTTAGGTGCTGTTGGCCTCGCTGTTGCAGAAGGGGCACGAGCCAGAGGTGCATCCAAAATAATAGGTGTGGACATCAACAAAGACAAATTCATTAAAGCCCAAGTAATGGGAATCACAGACTTCATAAATTCAAGGGATGAAGAGAAGCCGGTATATGAGAGAATCAGAGAAATGACTGGAGGAGGTGTACACTACAGTTTCGAATGTACTGGAAACTTGAATGTTCTAAGGGATGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACGGTATTATTGGGAATTCAAGCAACACCAAAGATGCTTCCCATCCACCCGATGGAACTCTTTGATGGTCGCAGAATTGTAGGATCTGTCTTTGGAGGTTTCAAAGGGAAAAGTCAGTTGCCTCATTTTGCCAGAGAATGCGTACAAGGAGTGGTGAAGCTGGATAATTTCATTGCTCACGAGCTTCCCTTCGAGGAGATAAACAATGCATTCGATCTTTTGGTCACTGGGAAGTCACTGAGATGTCTTATGCACCTCTAA 1197 0.4678 MEGAKVANGNGSLNLKPSETKGKIITCKAAVAYGPGEPLVVEQVLVHPPQKMEVRIKILYTSICHTDLSAWRGENESQRAFPRIFGHEASGVVESVGEGVSDMEEGDMVVLIFNGECGECSYCKCELTNMCERFGVNPMKKVMAGDGTCRFSTINGKPIFHFLNTSTFTEYTVVDSACVVKLHRDLTLNLKNLTLLSCGVSTGVGAAWNTANVHSGSSVAVFGLGAVGLAVAEGARARGASKIIGVDINKDKFIKAQVMGITDFINSRDEEKPVYERIREMTGGGVHYSFECTGNLNVLRDAFLSAHEGWGLTVLLGIQATPKMLPIHPMELFDGRRIVGSVFGGFKGKSQLPHFARECVQGVVKLDNFIAHELPFEEINNAFDLLVTGKSLRCLMHL 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi324g00006 398 PANTHER ALCOHOL DEHYDROGENASE 22 395 - -
Gabi324g00006 398 SUPERFAMILY GroES-like 20 222 IPR011032 -
Gabi324g00006 398 Pfam Alcohol dehydrogenase GroES-like domain 53 181 IPR013154 -
Gabi324g00006 398 Gene3D - 203 341 - -
Gabi324g00006 398 FunFam S-(hydroxymethyl)glutathione dehydrogenase 203 341 - -
Gabi324g00006 398 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 86 100 IPR002328 GO:0008270|GO:0016491
Gabi324g00006 398 FunFam Alcohol dehydrogenase 6 30 215 - -
Gabi324g00006 398 Pfam Zinc-binding dehydrogenase 226 345 IPR013149 -
Gabi324g00006 398 SUPERFAMILY GroES-like 348 397 IPR011032 -
Gabi324g00006 398 Gene3D - 30 393 - -
Gabi324g00006 398 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 189 362 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi324g00006 Gabi-Chr324 55388 62209 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi324g00006 53 387 Monolignol Biosynthesis Gene Families AT2G21890 25.284 2.61e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi324g00006 K00001 - gmx:100819896 627.861