Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3247g00063 ATGGGCACTGAGTTCCCACACGTTTCCACCGCCACTAAATGGCTGGGCTTCGTGACGGCGGTGTGGATTCAAGCAATCTCCGGCAACAACTATACTTTCCCCAATTATTCCGATGCTCTGAAATCCCTCATGCATCTCACCCAGATACAGCTCAACAGTCTCTCTGTGGCTAAAGATATTGGCAAGGCTTTTGGCATACTTGCTGGCCTTGCCTCCGATCGATTCCCAACCTGGGCTATTCTGCTCATAGGCTCCGTCGAAGGCATCATCGGCTATGGATTTCAGTGGCTAGTTGTCAGTCAAAGAATTCAACCCCTTCCCTATTGGCAGATGTGCATATTTCTGTGCATGGGGGGAAACAGCTCATCCTGGATGAACACGGCGGTTATAGTCACTTGCATACGAAACTTCCGCCGTAACAGAGGCCCCGTTTCCGGCATTCTCAAAGGGTATGTGGGGTTGAGCACCGCCATATTCACTGACCTATGCTCTGCTCTCTTCGCCAACGACCCTGCTTCCTTCCTCCTCATGCTGTCTCTAGTCCCCTTCGTCGTTTGCCTCGCCGGCATCTTTTTACTCCGTGAGGTCCCTCCTGCGAATTCCACCGAAATCCAAGACAAGGAAGAGTCAAGGTATTTCGGCCTTTTCAACGCCGCCGCCGCCGCCGTTGCCGTTTACCTCTTGGCTTTTGGCTTCGTGCCCAATCCTAGCACTTTGTTATCTCGGGTATTCGCCGTCGTTTTGCTCCTCCTGTTAGTGGCGCCGTTAGGGATTCCGGTCTACTCTTACTTCAAAGCCCGCGGATCGGACCGGTTCAAACCGGCCCTGGATATGGAGGGACGGGTGAATGAAGCGTTGCTTCCCAGTCACGACAGGGGAAAAGAAACCGAGGCGGAAAGAGTGAAGGAATCAGCACAGGACACGGAGGCGGCGGTGATGATTGGAGAAGAACACACCATAGTGGAGGCGCTTAAAACCGTGGACTTTTGGATCTTGTCTGTTTCTATGCTGTGTGGGGTTGGAACGGGTTTGTCCGTTATTAACAATATGGGCCAAATGGGGTTGGCGCTTGGTTACTCGGACGTTTCCATCTTTGTATCCTTGATCAGTATTTGGGGCTTTTTCGGTCGGATCATTTCGGGTTCCGTTTCTGAGTACTTCATCAAGAAAGGTGCAACTCCTAGACCTCTTTGGAATGCAGCGTCTCAAATTCTGATGGCCGTGGGATACATATTACTCGCAATGGCTGTGCCCGGTTCACTTTACATAGGGTCTGTTGTAGTTGGCTTATGCTACGGAGTCCGAGTCGCCATTACTGTCCCGACAGCCTCTGAGTTATTTGGCCTCAAATATTATGGTCTCATGTACAACATTCTAATCCTTAACCTTCCCCTTGGCTCTTTCCTCTTTTCTGGTCTGCTTGCTGGCATACTATATGATATGGAGGCAACTCCCACCGCAGGAGGAGGCAACACTTGTGTTGGAGCTCATTGTTACAGACTAGTATTCATAATCATGGCTGCATCTTGTATTGTTGGGTTCTTCTTAGACATTCTATTGTCAATCAGAACCACGAAGGTTTACGACAAGATTTCATTGAGCAAAAAAAACCAATACATCCTCGATGACATCAAGTAG 1638 0.4976 MGTEFPHVSTATKWLGFVTAVWIQAISGNNYTFPNYSDALKSLMHLTQIQLNSLSVAKDIGKAFGILAGLASDRFPTWAILLIGSVEGIIGYGFQWLVVSQRIQPLPYWQMCIFLCMGGNSSSWMNTAVIVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFANDPASFLLMLSLVPFVVCLAGIFLLREVPPANSTEIQDKEESRYFGLFNAAAAAVAVYLLAFGFVPNPSTLLSRVFAVVLLLLLVAPLGIPVYSYFKARGSDRFKPALDMEGRVNEALLPSHDRGKETEAERVKESAQDTEAAVMIGEEHTIVEALKTVDFWILSVSMLCGVGTGLSVINNMGQMGLALGYSDVSIFVSLISIWGFFGRIISGSVSEYFIKKGATPRPLWNAASQILMAVGYILLAMAVPGSLYIGSVVVGLCYGVRVAITVPTASELFGLKYYGLMYNILILNLPLGSFLFSGLLAGILYDMEATPTAGGGNTCVGAHCYRLVFIIMAASCIVGFFLDILLSIRTTKVYDKISLSKKNQYILDDIK 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3247g00063 545 CDD MFS_Mch1p_like 13 513 - -
Gabi3247g00063 545 Gene3D MFS general substrate transporter like domains 286 536 IPR036259 -
Gabi3247g00063 545 Gene3D MFS general substrate transporter like domains 10 276 IPR036259 -
Gabi3247g00063 545 SUPERFAMILY MFS general substrate transporter 13 525 IPR036259 -
Gabi3247g00063 545 Pfam Nodulin-like 13 260 IPR010658 -
Gabi3247g00063 545 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3247g00063 Gabi-Chr3247 415176 417642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3247g00063 11 538 Nodulin-like Gene Family AT4G34950 65.586 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3247g00063 - - gmx:100813607 817.379