Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3247g00057 ATGGCTAAAATTCGGTTGAACACTACTCCTCCTCCTCAACCACTACTTTACTGCATCTTGTTCATTCTCTTTAGTTTACTCTCCTCCCAAAATTTAGCTTTTTCCACGGATCAAATTTTCAAAACCTTCATCTTCAGGATTGATTCTGAATCCAAGCCCTCCATTTTCCCCACTCACTACCACTGGTACACCTCCGAGTTCGCCGAACCAACTCGCATACTCCATCTTTACGACACCGTTTTCCATGGCTTCTCTGCGGTTCTTACTCAACAACAAGTTGCTTCCCTCACCCAACACCCCTCTGTACTTGCAGTCTTCGAGGATCGTCGCCGCCAACTTCACACCACTCGCTCCCCACAGTTTCTTGGCCTCAGAAACCAGCGCGGTCTTTGGTCCCAATCCGATTACGGCTCCGATGTAATTATCGGAGTCTTCGACACGGGGATTTGGCCGGAGCGCCGGAGCTTCGCCGATGTTAATTTGGGCCCCGTTCCTCGTCGCTGGAAAGGGGTTTGCCAGGCGGGGGTTAAATTTTCGGCCCGTAACTGTAACCGGAAGTTGATTGGTGCTAGATTTTTCTCGAAAGGGAACGAGGGAAGTGGCAGTTCCATCAACGACACCGTCGAATTCCGATCTCCTCGAGACGCCGATGGCCACGGAACCCATACGGCATCAACTGCGGCTGGTCGTTACGTTTTTGGGGCAAGCATGGCGGGCTATGCTTCTGGAATCGCAAAGGGCGTGGCTCCAAAAGCCCGATTGGCTGTTTACAAGGTGTGTTGGAAGAATTCAGGTTGCTTTGATTCTGACATTCTCGCTGCATTCGACGCCGCCGTCGCCGACGGTGTCGATGTGATTTCCATATCAATTGGCGGCGGCGATGGTATTTCCTCACCTTATTATCTGGACCCCATTGCTATTGGATCTTACGGTGCAGTTGCGAGGGGTGTTTTTGTGTCTTCTTCGGGCGGAAATGATGGGCCCAGTGGAATGTCAGTGACCAACCTTGCTCCGTGGTTGACGACGGTCGGAGCAGGCACTATTGATCGGGATTTCCCTGCGGAGGTTATATTGGGTGATGGACGCAGACTCTCCGGCGTGTCTCTTTACTCAGGAGCGCCATTGAAGGAGAAAATGTATCAACTAATTTATCCCGGAAAATCAGGGGTACTTACGGATTCACTGTGTATGGAAGATGCACTGGATCCCAACATTGTGAAGGGCAAGATAGTAATTTGCGACAGGGGAAGTAGCGCGAGAGTTGCCAAAGGGCTGGTGGTTAAGAAAGCCGGTGGCGTTGGAATGATTCTGGCAAATGGTATGTCTAACGGAGAAGGTCTTGTTGGGGATGCTCATCTTCTTCCTGCATGTGCACTCGGTGCTGACGAAGGTGATGTCATCAAAGCATACATCTCATCCTCTACTAATCCCACGGCCACCATTGATTTCAAAGGAACTGTACTTGGAATCAAACCGGCACCGGTTCTGGCATCGTTCTCTGCCAGAGGACCCAACGGGTTGAACCCGGAGATACTTAAACCGGATTTGATTGCACCGGGAGTCAACATTCTCGCAGCTTGGACCGATGCGGTTGGTCCTTCTGGTCTTGATTCTGATACGCGGAGAACTGAGTTCAGCATCTTGTCGGGTACTTCAATGGCTTGTCCACATGTGAGTGGTGCAGCTGCCTTGTTGAAATCTGCGCATCCTGATTGGAGCCCTGCTGCCGTAAGGTCGGCGATGATGACGACGGCGACTCTGCTTGACAATTCTAACCACCTCATGATCGACCAAGCCACCGGCAATGGTTCCACGCCCTTTGATTTCGGCGCTGGACATCTCAATTTGGGTCTTGCCATGGACCCTGGTTTGGTATACGATATCTCCGACGATGACTACGTCAACTTCTTATGCGGTATCGGTTATGGGCCTAAGGTAATTCAGGTGATTACTCGATCAGCACCGAATTGTCCGGCCAGGAAGCCGTTGCCGGAGAATTTGAATTACCCATCGTTTGTTGCTCTGTTCCCCGGCGAGTCCAGAGGGTTGTCGAAAAAGACGTTCATCCGGACGGTGACGAACGTGGGCCCGACAAACTCGGTTTACAGGGTGAGGGTGGAGTCGCAGGTGAAAGGGGTGACGGTGACGGCGAGGCCATCGCAGCTTGTGTTCTCTGAGACAGTCAAGAAGGGTAGTTTCGTGGTGACCGTGACGGCGGATACCAGGAATCTGATGATGGGACAGTCCGGGGCAGTGTTCGGGTCGCTTTCTTGGACGGACGGAAAACGCGTGGTTCGGAGCCCCATAGTCGTTAGTCAATTTGAACCCTCGTAA 2334 0.5193 MAKIRLNTTPPPQPLLYCILFILFSLLSSQNLAFSTDQIFKTFIFRIDSESKPSIFPTHYHWYTSEFAEPTRILHLYDTVFHGFSAVLTQQQVASLTQHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSQSDYGSDVIIGVFDTGIWPERRSFADVNLGPVPRRWKGVCQAGVKFSARNCNRKLIGARFFSKGNEGSGSSINDTVEFRSPRDADGHGTHTASTAAGRYVFGASMAGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDAAVADGVDVISISIGGGDGISSPYYLDPIAIGSYGAVARGVFVSSSGGNDGPSGMSVTNLAPWLTTVGAGTIDRDFPAEVILGDGRRLSGVSLYSGAPLKEKMYQLIYPGKSGVLTDSLCMEDALDPNIVKGKIVICDRGSSARVAKGLVVKKAGGVGMILANGMSNGEGLVGDAHLLPACALGADEGDVIKAYISSSTNPTATIDFKGTVLGIKPAPVLASFSARGPNGLNPEILKPDLIAPGVNILAAWTDAVGPSGLDSDTRRTEFSILSGTSMACPHVSGAAALLKSAHPDWSPAAVRSAMMTTATLLDNSNHLMIDQATGNGSTPFDFGAGHLNLGLAMDPGLVYDISDDDYVNFLCGIGYGPKVIQVITRSAPNCPARKPLPENLNYPSFVALFPGESRGLSKKTFIRTVTNVGPTNSVYRVRVESQVKGVTVTARPSQLVFSETVKKGSFVVTVTADTRNLMMGQSGAVFGSLSWTDGKRVVRSPIVVSQFEPS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3247g00057 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Gabi3247g00057 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 68 771 IPR045051 -
Gabi3247g00057 777 SUPERFAMILY Subtilisin-like 113 624 IPR036852 GO:0004252|GO:0006508
Gabi3247g00057 777 CDD PA_subtilisin_like 356 481 - -
Gabi3247g00057 777 Gene3D - 637 774 - -
Gabi3247g00057 777 FunFam Subtilisin-like protease SBT1.5 139 362 - -
Gabi3247g00057 777 CDD Peptidases_S8_3 112 586 IPR034197 -
Gabi3247g00057 777 ProSiteProfiles Serine proteases, subtilase domain profile. 112 620 - -
Gabi3247g00057 777 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Gabi3247g00057 777 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Gabi3247g00057 777 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Gabi3247g00057 777 FunFam subtilisin-like protease SBT1.5 349 488 - -
Gabi3247g00057 777 Pfam Subtilase family 137 603 IPR000209 GO:0006508|GO:0008236
Gabi3247g00057 777 Pfam Fibronectin type-III domain 666 771 IPR041469 -
Gabi3247g00057 777 SUPERFAMILY PA domain 406 474 IPR046450 -
Gabi3247g00057 777 Gene3D Peptidase S8/S53 domain 139 633 IPR036852 GO:0004252|GO:0006508
Gabi3247g00057 777 Pfam Peptidase inhibitor I9 56 114 IPR010259 -
Gabi3247g00057 777 Pfam PA domain 402 465 IPR003137 -
Gabi3247g00057 777 Gene3D - 349 488 - -
Gabi3247g00057 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 29 114 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3247g00057 Gabi-Chr3247 377576 379909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3247g00057 21 775 Subtilisin-like Serine Gene Family AT4G34980 72.955 0.0 1165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3247g00057 - - gmx:100817537 1277.31