LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi3247g00050	ATGATGTCAAGCCACCACCAAGACGACCTCGATTTGCTCCTTTCACTTCACGGTGATAGGGTTCTTGAAACCCCTCCTCCTGCTTCTCCCTCCTCACCTTCAACCTCACCAGGTTACCTCTCCGATGATGACTTTCCCAACCAAAGGGAGAAGACTGATATGTCCGTATTCAGAAATGCTGTTGAAGATTGCCTTCCTTACGAACCCCCTAAATCTAAAAAGAAACCTATTAACACTAATGATGCCCTCCTCGAAAAGTTTTCAGGTCTTCGAATAAGGAACCAATTGTTAACCTCTGCTGAGCTTAGGGAACGCTTCTCAGACATTCGTTTTGTTCGGTTATCAGTTATCAAGAATTTGTTGATTGGGGATACTTTTTCTGGAAGTTGGGTGACTGTTGGAGTATTGACCGAGAAGGGGATTCAGAAAACAAGTTCAACGGGGAAGAGTTATTGTATATGGAAAATTGGGTGTTTGGATCAAAATACTGTTTCTCTTTTCTTGTTTGGTGATGCTTATCAGAGGAACTTGCAAGAGCAGGCGGGAACAGTCTTTGCACTCTTTAATTGTTCTGTCCGCAAGGATGCAGCGGGTAATGGTTTTTCTTTGAGTATATTTTCCCCTAGTCAAATTTTGAAGATGGGCACCTCTGTTGATTATGGAGTTTGCAAAGGGAAAAGAACGGATGGGATGACTTGTACGCTGGTCATAAATAAACGCCATGGGACGTATTGTAAATATCATAAATCAACAGCATCACAGAAATATTCGACAACGCGAACTGAACTCAAGGGAGGAAATTTAAGGACAGCCGTTAGGCCTAGGGATTATCTCAGATCAGAAGGAATTTACTTAGTTGACCCTCTTGCTGACAAAACAAACGGGAAAAAGTCTCAGCCATTGAAATTGTTGTCTGTGGATGGTCTCAAAAAGGCATTGAGCAATGCAGGAAAAGTAACAACAAATACACATTCGCAAGGGATTAGATTTCTTTCTGAGGTTGCAGGCAAATTGGGTTCTAAAATAATAAAGAAAGGACCAAAGACTCCAAATGAACAAAGCAATTGCACAGAGAAGAGGAAATCATCTTTTATGAACGTGGGATCCAATGCAGTCATGAGAAACCAACCCTTGGATGTAAAAAGAATAAAAACAGATGGGCAAGCGTCGGTCGATAAAACCACAAAAAGTACAGGAAAGATGATTGAATTAGATCTTGTTAGTTCGGATGATGACTTCTGA	1242	0.4122	MMSSHHQDDLDLLLSLHGDRVLETPPPASPSSPSTSPGYLSDDDFPNQREKTDMSVFRNAVEDCLPYEPPKSKKKPINTNDALLEKFSGLRIRNQLLTSAELRERFSDIRFVRLSVIKNLLIGDTFSGSWVTVGVLTEKGIQKTSSTGKSYCIWKIGCLDQNTVSLFLFGDAYQRNLQEQAGTVFALFNCSVRKDAAGNGFSLSIFSPSQILKMGTSVDYGVCKGKRTDGMTCTLVINKRHGTYCKYHKSTASQKYSTTRTELKGGNLRTAVRPRDYLRSEGIYLVDPLADKTNGKKSQPLKLLSVDGLKKALSNAGKVTTNTHSQGIRFLSEVAGKLGSKIIKKGPKTPNEQSNCTEKRKSSFMNVGSNAVMRNQPLDVKRIKTDGQASVDKTTKSTGKMIELDLVSSDDDF	413

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi3247g00050	413	FunFam	DNA replication licensing factor mcm10	76	250	-	-
	Gabi3247g00050	413	Gene3D	-	76	249	IPR012340	-
	Gabi3247g00050	413	PANTHER	PROTEIN MCM10 HOMOLOG	30	395	IPR040184	GO:0003690\|GO:0003697\|GO:0006270
	Gabi3247g00050	413	Pfam	Primase zinc finger	215	260	IPR015408	GO:0005634\|GO:0006260
	Gabi3247g00050	413	MobiDBLite	consensus disorder prediction	14	48	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi3247g00050	20	412	Core DNA Replication Machinery Family	AT2G20980	55.860	8.63e-143	410

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi3247g00050	K10736		-	gmx:100527758	573.163