Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3247g00031 ATGGCTGATCCGCAGCCCCTGCTGCTCAACGATTCCGAGCCAACTCAGTTTCAAACCGGCAGAACCACCCGAGTCGCTTCCGTTGACGTCTTCCGTGGCTTCTCTGTCTTTCTGATGATATTGGTTGATTACGGTGGCTCCATCTTCCCCATCATTTCCCATGCCCCCTGGAATGGTCTTCGTTTGGCTGATTTCGTCCTCCCATTTTTTCTCTTTGTTGCTGGAATTTCCCTTGCTCTTACATATAAGAGAAGGCCGCAGAGAAGAGAAGCTACATGGAAAGCCTTACTTAGAGCAGTGAAACTCTTTATTCTTGGTATTGTTCTTCAAGGTGGTTATTTTCACGGAATAACTTCCTTGACTTTTGGTGTTGACATTGAAAGAATACGGTGGATGGGCATTTTACAGAGGATATCTATTGGATACATTGTTGCAGCTTTATGTGAGATCTGGTTTCCAGCTCCGCGAGGGAAAGAATTAGGTTTCATCAAAAGTTATTACTGGCATTGGTTTATTATGATAATATTGTTGGCACTTTACTCGGGATTATTGTATGGTCTATATGTTCCAGATTGGCAGTTTGATGTATTGGCCTCAGCCTCTTCTTTGCCTCCAATTGATGGTGGCAATATTTACACGGTGAATTGTTCGGTGAGAGGTGATCTTGGACCTGCCTGTAATTCTGCCGGAATGATTGATCGCTATATTCTTGGTCTTGACCATCTGTACAGAAAGCCTGTTTACAGAAATCTTCAGGAATGCAATATGTCTAAGGGCCAAGTTTCAGATAGTTCACCTTCATGGTGTCATGCTCCTTTTGATCCAGAAGGCATTTTAAGCTCCATAACAGCTGCAGTTTCATGCATAATTGGACTTCAATATGGTCATGTTCTTGCCCATCTACAGGATCACAAAGGGCGCCTAGACAACTGGCTGTGGTTTTCAGTTTCATTTTTGGGTCTTGGATTGTTCCTAGCCTTAGTAGGCATTCCTCTGAACAAATCTCTGTACACAGTCAGTTATACGCTACTAACATCTGCAGCTTCTGGTCTCACATTCATCGCTTTATACGTTCTGGTAGATTTCCATGGTCACAGGCGTTTGACAACTGTGTTTGAGTGGATGGGAAAGCACTCCTTGAGTATATTTGTCCTTGTATCTTCAAACTTGGCCGTCATTGCTATTCAAGGATTTTATTGGAAAAAACCCGAAAACAACATTGAAGTGAGCGAAGAAGGGCACCAGAGCCATCACGGGAAAGACTACGTAGACCCACCGCCAGCACCTCTCATCGACTTAGCTGAGATTAAGCTCTGGTCCTTTTACAGAGCTCTCATTGCCGAGTTCATTGCCACACTCCTCTTCCTCTACATCACCGTCGCAACCGTCATCGGTAACAACAAACAAACCGGACCCTGCGACGGTGTTGGCCTTCTCGGCATCGCCTGGGCCTTCGGTGGCATGATCTTTGTCCTCGTATACTGCACCGCCGGTATCTCTGGTGGCCACATCAACCCTGCGGTAACTTTCGGCCTGTTCTTGGCTCGGAAAGTGTCTCTGATTCGAGCTATTTGTTACATGGTAGCACAGTGCTTGGGTGCTATTTGTGGCGTTGGTTTGGTGAAGGCTTTCATGAAGCACTCCTACAACTCTCTTCATGGCGGTGCTAACATGGTGAATACTGGCTACGCTAAAGGCACTGCACTGGGTGCTGAGATTATCGGCACTTTTGTGCTTGTGTACACCGTTTTCTCTGCCACTGACCCCAAGAGAAGCGCCCGTGACTCCCATGTCCCCGTTTTGGCCCCGTTGCCAATCGGGTTTGCTGTTTTCGTGGTTCACTTGGCTACCATACCAATCACTGGTACCGGGATAAACCCTGCTAGGAGCTTTGGTGCTGCTGTTATCATCAACGATACCAAAGTTTGGGATGACCATTGGATCTTCTGGGTTGGGCCATTCGTGGGAGCGTTGGCAGCAGCTGCATATCACCAATACATACTGAGAGCAGCAGCTATCAAGGCATTGGGATCTTTCCGAAGCAACCCCACCAACTAA 2058 0.4674 MADPQPLLLNDSEPTQFQTGRTTRVASVDVFRGFSVFLMILVDYGGSIFPIISHAPWNGLRLADFVLPFFLFVAGISLALTYKRRPQRREATWKALLRAVKLFILGIVLQGGYFHGITSLTFGVDIERIRWMGILQRISIGYIVAALCEIWFPAPRGKELGFIKSYYWHWFIMIILLALYSGLLYGLYVPDWQFDVLASASSLPPIDGGNIYTVNCSVRGDLGPACNSAGMIDRYILGLDHLYRKPVYRNLQECNMSKGQVSDSSPSWCHAPFDPEGILSSITAAVSCIIGLQYGHVLAHLQDHKGRLDNWLWFSVSFLGLGLFLALVGIPLNKSLYTVSYTLLTSAASGLTFIALYVLVDFHGHRRLTTVFEWMGKHSLSIFVLVSSNLAVIAIQGFYWKKPENNIEVSEEGHQSHHGKDYVDPPPAPLIDLAEIKLWSFYRALIAEFIATLLFLYITVATVIGNNKQTGPCDGVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAICYMVAQCLGAICGVGLVKAFMKHSYNSLHGGANMVNTGYAKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFVVHLATIPITGTGINPARSFGAAVIINDTKVWDDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3247g00031 685 CDD MIP 443 667 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3247g00031 685 Pfam Major intrinsic protein 436 663 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3247g00031 685 SUPERFAMILY Aquaporin-like 435 669 IPR023271 -
Gabi3247g00031 685 Gene3D Glycerol uptake facilitator protein. 428 685 IPR023271 -
Gabi3247g00031 685 NCBIfam MIP family channel protein 447 663 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3247g00031 685 FunFam Probable aquaporin PIP1-2 428 683 - -
Gabi3247g00031 685 ProSitePatterns MIP family signature. 503 511 IPR022357 -
Gabi3247g00031 685 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 24 148 IPR012429 -
Gabi3247g00031 685 PANTHER LD22376P 19 444 - -
Gabi3247g00031 685 PRINTS Major intrinsic protein family signature 571 589 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3247g00031 685 PRINTS Major intrinsic protein family signature 607 629 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3247g00031 685 PRINTS Major intrinsic protein family signature 443 462 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3247g00031 685 PRINTS Major intrinsic protein family signature 485 509 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3247g00031 685 PRINTS Major intrinsic protein family signature 522 541 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3247g00031 685 PRINTS Major intrinsic protein family signature 647 667 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3247g00031 Gabi-Chr3247 219758 247387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3247g00031 408 685 Major Intrinsic Protein MIP AT4G35100 87.770 1.35e-175 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3247g00031 - - vra:106761912 1197.19