Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3239g00033 ATGACTGATTCAATGCTCGCCGCTGAACCGGCGGCGTCCGATCTTGGCTTCGATGACTTCTCCGCTGAGTTCGACAATCTGCCGATCCCGTCCATGGATTCTCTGTTCGACAGCAGCACGCTGCCCTCGGAGGCCTTCGGCTCCGATCTGGAATTCGCCATGGATTTCGGCGAGAATGAAGAGTTCGAGATCACCTTCGACGACCTCGACAACCTCTGCATCCCCTCTGACGCCGATGATTTCCTTCTTCCCGACGCATGTAACCCTACCGGCGCTTCAATTTCGCCGATAAACGACGATCGCGGTGATTCTTCTCCAAAGACTTCCGATTGTCATGTTGCTAATTCCGATTCGCCGGAATCAGATGCTTCTGCGGTTTCCGGCAATCCAAGCTCCGGCGTTTCAGGGTTTTTCAATTCGCAAGCTTTGGATTCGGTTTTCGAGGGTAATTCAGGTAAACAGGATTCACATAACTCGGTTGATGTTAAAGTTTCAAGCTTTCCATCGCCGGAGTCTGAATTTTGCGACCGGGAAGAGTCTTCGAATGGACCGGTTTCGTCTCAGGGTTCGGGCAATGGTGGGTCGGGTGTATATGAAACTACGAACTCGCCTTCACCTGATTCTGACCATTACGAGAGAGACATTTCATCGTCTCATGCACATGCAATTGTGGATAAGGGTGTGAAGTTGGAGGAAAGTGGTAAAGGTTGTGATCTGAAGAGGAAGAAAGAGCAAAGTGAAGGAAATGCTGAGACTAGAACCATTAAGTACAGGAGGTCCTCAGTGCCTGTGGACAACAAGACCCAACAACAATCTGAGTCTGTTGTCAATGCCAGTGATGACGACGACGATAAAAGGAAGGCCAGGTTGATGAGGAATAGGGAAAGTGCACAGCTTTCGAGGCAGAGGAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCCACAATTGCTGATCTGAGTGGTCGGATTTCCTTTGTCATGGCTGAGAATGCTACTCTGAGACAGCAATTGGGTGCTGGTGTGATGTGTCCTCCTCCTCCACCAGCTCCAGGGATGTACCCTCATCCTCCCATGGCACCTATGGGTTATCCTTGGGTTCCCTGTGCTCCCTATGTTGTCAAGTCTCAAGGGTCTCAGGTTCCTTTGGTTCCCATTCCTAGATTGAAGCCTCAGCAACCAGCTTCAGCCTCCAAGAGTAAAAAGTCTGAGAGTAAGAAGACTGAGGTGAAAACTAAGAAGGTTGCCAGCATTAGTTTGTTGGGTTTGCTTTTCTTTGTCATGCTTTTTGGTTGGCTTCTTCCTCTGGTGGATTTTAAGTTTGGAGGTTTAGTGGACAATGTTCCTGGTAGGTATAGCTATGTTAGTGATAGGTTGTACGGTCAGGGTGGAGGCAGGGTTTGGCCTGTAAATGGTCGTAGGAATGGATCCGAAAGAGGTGAGGGATTAGAATTTTCTAATGGAAGGTTTAGTGTTTCTGACAGAACGGAGTATGATAGAGGCCGAAAACTTGGAGAAGAAACGCATGCGCGGCAAGACCCTAGAGATGTTCATCAGGGCAATGGCAGTGAGCCTCTTCTTGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGAAACTTGATAATCCATTCTATTCTGGCCAGTGAGAAAGCTATGGCATCTCAAACTGCTCAGGCAAAGAAGGACAAGAGTGAAACTGGTTTGGCCATTCCTAAATCTGCATTGGCTATTCCTGAAGTTGGAAGAAATAGAGGTCAACATCCACACGTTTATAGGGTTTCTCCTGAACAGAGGAAGGCTCTTGGTTCTGGTTCAACCAAAACTTTGAAGGACCATATGAAGTCCACTGCAACTGATGGTACAATGCAACAGTGGTTCCGTGAAGGCCTTGCAGGGCCAATGTTAAGTTCTGGCATGTGCACCGAAGTTTTTCAGTTTGATGCCTCTCCAACCCCTGGAGCTATAGTTCCAGCAACATCAGTAGCTGACATCTCTACCAAAAATCGTCAGAATGCTACGGCTGTCAAAAAGAGCAGGAACAGAAGAATCCTCCATAGGCTCCCAGATCGACTTGCTGGAACCAGCCTGAACATAACTGAAGAACATGTAAGAAATTTGCAGAATGACCACCTCCATGGTAATAAATCTTCTATGGTGGTTTCAGTGCTTGTTGATCCCAAAGAGGCAGGAAATGGTGATGTTGATGGCATGATGACACCAAAGTCGCTCTCTCGGATTTTTGTGGTTGTGCTTATCGATAGTGTCAAGTATGTCACTTACTCATGTGGTCTTCCACGTGTTTCTCCCCATCTGGTGACTGCTTATGTTTGA 2361 0.4748 MTDSMLAAEPAASDLGFDDFSAEFDNLPIPSMDSLFDSSTLPSEAFGSDLEFAMDFGENEEFEITFDDLDNLCIPSDADDFLLPDACNPTGASISPINDDRGDSSPKTSDCHVANSDSPESDASAVSGNPSSGVSGFFNSQALDSVFEGNSGKQDSHNSVDVKVSSFPSPESEFCDREESSNGPVSSQGSGNGGSGVYETTNSPSPDSDHYERDISSSHAHAIVDKGVKLEESGKGCDLKRKKEQSEGNAETRTIKYRRSSVPVDNKTQQQSESVVNASDDDDDKRKARLMRNRESAQLSRQRKKHYVEELEEKVRSMHSTIADLSGRISFVMAENATLRQQLGAGVMCPPPPPAPGMYPHPPMAPMGYPWVPCAPYVVKSQGSQVPLVPIPRLKPQQPASASKSKKSESKKTEVKTKKVASISLLGLLFFVMLFGWLLPLVDFKFGGLVDNVPGRYSYVSDRLYGQGGGRVWPVNGRRNGSERGEGLEFSNGRFSVSDRTEYDRGRKLGEETHARQDPRDVHQGNGSEPLLASLYVPRNDKLVKIDGNLIIHSILASEKAMASQTAQAKKDKSETGLAIPKSALAIPEVGRNRGQHPHVYRVSPEQRKALGSGSTKTLKDHMKSTATDGTMQQWFREGLAGPMLSSGMCTEVFQFDASPTPGAIVPATSVADISTKNRQNATAVKKSRNRRILHRLPDRLAGTSLNITEEHVRNLQNDHLHGNKSSMVVSVLVDPKEAGNGDVDGMMTPKSLSRIFVVVLIDSVKYVTYSCGLPRVSPHLVTAYV 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 87 134 - -
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 389 414 - -
Gabi3239g00033 786 Gene3D - 284 346 - -
Gabi3239g00033 786 Pfam bZIP transcription factor 284 343 IPR004827 GO:0003700|GO:0006355
Gabi3239g00033 786 SUPERFAMILY Leucine zipper domain 285 343 IPR046347 GO:0003700|GO:0006355
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 206 260 - -
Gabi3239g00033 786 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 343 IPR004827 GO:0003700|GO:0006355
Gabi3239g00033 786 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 147 286 - -
Gabi3239g00033 786 Coils Coil 308 328 - -
Gabi3239g00033 786 CDD bZIP_HY5-like 286 337 - -
Gabi3239g00033 786 FunFam bZIP transcription factor 49 284 346 - -
Gabi3239g00033 786 PANTHER BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED 54 781 - -
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 499 528 - -
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 499 523 - -
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 147 166 - -
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 261 276 - -
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 179 205 - -
Gabi3239g00033 786 MobiDBLite consensus disorder prediction 91 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3239g00033 22 783 bZIP Transcription Factor Family AT2G40950 49.418 5.74e-179 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3239g00033 bZIP_1 1.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3239g00033 K25783 - gmx:100101871 970.689