Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3238g00028 ATGAAAAGAAGCTATTATAAGATTTATAACACATACATAAATATAGGGTTGTCTGAGGAGCCGGTGGTGCAACAAGAAAAAGAGGTGGTAGGGAGTAGAGAAAAGAGCACGATGGAGGCAGTGGATGAGAAGGGGAAGCAACAGCAGAGGAGGAGGAGGAGGAGAACGAGATTGAAGATGAATTATCATCATCGTGATCTTGATGAGAATGAAGACGAGGAAGGAGAAGAAGATGCCGATGAAGGGAACAATGAGAGGCAAAGAGAGCACCCATTTATTGTAACGGAGCCTGGTGAGGTTGCACGTGGCAAGAAGAACGGCCTCGATTATCTATTCCACCTCTACGAGCAATGCCGTGAGTTCTTGATCCAGGTTCAAAACATCGCCAAGAACCGTGGTGAAAAATGCCCCACCAAGGTGACAAACCAGGTGTTTAGGTACGCCAAGAAGGCAGGAGCGAGCTACATTAACAAACCCAAAATGCGACATTACGTGCACTGTTATGCATTGCACTGTCTTGACGAGGAGGTTTCGAACGAGCTGAGAAGGGCTTTCAAGGAAAGAGGAGAAAATGTTGGTGCGTGGAGACAAGCATGTTACAAACCCCTTGTGGCAATAGCAGCTCTTCAAGGTTGGGACATTGATGCCATCTTCAATGCACATCCTCGTCTTTCAATATGGTACGTCCCAACCAAGCTTCGTCAGTTTTGTCACGCCGAGAGGAACAGTAACACTGCTTCAAGTTCTCTCTCTGTCGGCAGCGGCCACCTAATTCCTTTCTAA 783 0.4687 MKRSYYKIYNTYINIGLSEEPVVQQEKEVVGSREKSTMEAVDEKGKQQQRRRRRRTRLKMNYHHRDLDENEDEEGEEDADEGNNERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKNRGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRAFKERGENVGAWRQACYKPLVAIAALQGWDIDAIFNAHPRLSIWYVPTKLRQFCHAERNSNTASSSLSVGSGHLIPF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3238g00028 260 Gene3D Protein LEAFY 75 245 IPR038276 -
Gabi3238g00028 260 MobiDBLite consensus disorder prediction 28 91 - -
Gabi3238g00028 260 PANTHER PROTEIN LEAFY 15 254 IPR002910 GO:0003677|GO:0006355
Gabi3238g00028 260 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 82 245 IPR035209 GO:0003677
Gabi3238g00028 260 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3238g00028 Gabi-Chr3238 296294 297588 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3238g00028 66 254 Orphan Transcription Factor Family AT5G61850 79.688 2.73e-113 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LFY Gabi3238g00028 C_LFY_FLO 2.4e-107 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3238g00028 - - gmx:100798196 382.874