Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3238g00015 ATGGTTGAAGCAGAAACAAGTGATAAGCCGTTAGTAAGCATGTCTGCGAGCGCTGCACTCTCCTCCACAACTTCACACCTCACTCTCCTTCCTTCTCTCCCTTCCACCGCTCCACTTTCTCTTAGATTTTCCTTCCCTTTCCGGGAAAACAGAAACCAAATTTCACCTCTCACAACCCTTTTCCCTCACAAGCACCCGTTTTCATCAGCAAGGCCTGCCAGAGTCTTGGTGAAATCTCAGGCTACTGCACCTGCTTCTACTGAGGCTGTGAAAGTGACACCTGTGCCTTCTGACATGAAGGCCTGGGTCTATGGAGAGTATGGGGGTGTGGATGTTTTGAAGTTTGATTACAATGTTGCTGTACCTGATTTGAAGGAGGATCAGGTCCTTGTTAGAGTTGTTGCTGCATCTCTTAACCCTGTTGATGCCAAGAGAAGGCAGGGGAAGTTCAAGGCCACTGATTCTCCTCTTCCGACTGTTCCGGGCTATGATGTTGCTGGTGTGGTGGTGAAGGTTGGTAGTCAAGTAAAGGACTTCAAAGTGGGTGATGAAGTATATGGGGATGTAAATGAGAAAGCACTGGAAGGGCCTGAGCAGTTTGGGTCTCTGGCTGAGTACACTGCTGTTGAGGAGAAATTGCTGGCACCAAAACCTAAGAATTTGGACTTTGCTCAAGCTGCTTCTCTTCCTCTAGCCATTGAGACGGCTTATGAGGGTTTGGAGAGGACTGGATTTTCTTCTGGCAAATCTATTCTTGTTCTAAATGGCTCTGGTGGAGTTGGAAGCCTAGTGATTCAGCTAGCTAAGCAAGTTTTTGGAGCTTCAAGAGTTGCTGCAACTTCAAGCACTAGAAATTTGGAGCTGTTGAAAAGCTTGGGAGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGACTTGCCAGAAAAATTTGATGTAGTTTATGATGCCATTGGGCAATGTGACAGGGCTGTGAAGGTTGTGAAAGAAGGTGGAATTGTGGTAGCACTCACAGGTGCAGTTACACCACCTGGCTTCAGATTTGTAGTCACTTCCAATGGAGCTGTTCTGAGGAAATTAAACCCTTATTTAGAGAGTGGAAAGGTGAAACCAGTTATAGACCCCAAAGGTCCATTCCCCTTTGCACAGGTTGCTGAAGCCTTCTCTTACCTTGAAACAAACCGAGCTACAGGAAAGGTTGTTGTACATCCCATCCCATGA 1224 0.4641 MVEAETSDKPLVSMSASAALSSTTSHLTLLPSLPSTAPLSLRFSFPFRENRNQISPLTTLFPHKHPFSSARPARVLVKSQATAPASTEAVKVTPVPSDMKAWVYGEYGGVDVLKFDYNVAVPDLKEDQVLVRVVAASLNPVDAKRRQGKFKATDSPLPTVPGYDVAGVVVKVGSQVKDFKVGDEVYGDVNEKALEGPEQFGSLAEYTAVEEKLLAPKPKNLDFAQAASLPLAIETAYEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCDRAVKVVKEGGIVVALTGAVTPPGFRFVVTSNGAVLRKLNPYLESGKVKPVIDPKGPFPFAQVAEAFSYLETNRATGKVVVHPIP 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3238g00015 407 Gene3D - 106 403 - -
Gabi3238g00015 407 Gene3D - 240 354 - -
Gabi3238g00015 407 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 90 407 IPR044626 GO:0016628
Gabi3238g00015 407 Pfam Alcohol dehydrogenase GroES-like domain 127 189 IPR013154 -
Gabi3238g00015 407 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 248 269 IPR002364 GO:0008270|GO:0016491
Gabi3238g00015 407 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 221 344 IPR036291 -
Gabi3238g00015 407 CDD MDR_like_2 99 403 - -
Gabi3238g00015 407 SMART PKS_ER_names_mod 108 403 IPR020843 GO:0016491
Gabi3238g00015 407 Pfam Zinc-binding dehydrogenase 292 403 - -
Gabi3238g00015 407 SUPERFAMILY GroES-like 97 253 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3238g00015 Gabi-Chr3238 149690 153049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3238g00015 123 295 Monolignol Biosynthesis Gene Families AT4G39330 25.126 1.25e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3238g00015 K18980 - gmx:100810816 620.157