Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3238g00002 ATGGCTTCTTCAATGAGGATCTCAAGACTAATCACTCGCTCCTTTTCTTCTGTTTCTTCTACCTCTTTGTTTTCTCGAGGACTCTGGAAATATAGCACTGTTGCTGCCAGTGAAGAACCCATTAAATCACCAGTACAAGTAGAGCACACCCAGCTCTTAATTGATGGAAAGTTCGTAGATGCTGCTTCTGGTCAAACTTTTCCAACCTTAGACCCAAGGACAGGGGAAGTGATTGCTCATGTTGCTGAGGGTCACTCTGAAGATGTTGATCGAGCTGTTGCAGCTGCACGCAGAGCATTTGATCAAGGGCCATGGCCTAAGATGGCAGCCTATGAAAGGCAAAGGATATTGTTGCGTGCTGCTGATCTGCTTGAAAAGCATAATGATGAGCTTGCAGCACTTGAGACTTGGGATAATGGGAAGCCATATGAACAATCTGCACAGATTGAAATTCCAATGCTGGTTCGCCTATTTCGATACTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGACCTCATCATGTGCAAATATTGCATGAACCCATTGGTGTTGCGGGTCAGATCATTCCATGGAACTTCCCTCTTGTCATGTTTGCTTGGAAGGTTGGACCAGCATTGGCATGTGGCAACACTGTTGTTCTGAAAACAGCTGAGCAGACACCATTATCTGCTTTATATGCAGCAAAACTATTTCATGAGGCTGGACTTCCTCCTGGTGTTTTAAATATAGTATCTGGCTATGGTCCAACTGCTGGTGCTGCTCTTGCTAGTCACATGGATGTGGATAAGCTTGCTTTTACTGGTTCAACTGATACTGGAAAAATTGTCCTTGAACTGGCGGCTAAAAGCAATCTTAAGCCTGTAACTTTGGAGCTTGGTGGGAAATCCCCCTTTATTGTATGTGAAGATGCTGATGTAGATGACGCTGTTGAGCTAGCACATTTTGCCTTATTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTAGAACATTTGTACATGAACGTGTATATGACGAGTTTGTTGAGAAAGCGAAGGCTCGTGCTTTGAAACGTGTTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGACCAATTTGAGAAAATACTGAAGTATATCAGATCTGGTGTTGAAAGTGGAGCTACCCTTGAAACTGGAGGAGATAGGATTGGCAACAAGGGCTTCTTTATTCAACCTACTGTCTTCTCAAATGTTCAGGATGGCATGCTGATTGCTAAGGAAGAGATTTTTGGTCCTGTACAATCCATATTAAAGTTCAAGGACCTTGGTGAGGTAGTTCAAAGAGCAAATAAGACACGTTATGGCCTTGCAGCAGGGGTCTTCACAAAGAACATAGACACTGCAAATACATTGACACGAGCATTGAGAGTTGGAACTGTATGGGTAAACTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGAGGGTACAAGATGAGTGGGCAGGGTAGAGAAAAAGGAGTGTACAGTCTTAAGAACTACTTGCAAGTGAAGGCTGTTGTAACTCCCTTGAAGAGCCCAGCATGGCTTTGA 1593 0.4382 MASSMRISRLITRSFSSVSSTSLFSRGLWKYSTVAASEEPIKSPVQVEHTQLLIDGKFVDAASGQTFPTLDPRTGEVIAHVAEGHSEDVDRAVAAARRAFDQGPWPKMAAYERQRILLRAADLLEKHNDELAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPHHVQILHEPIGVAGQIIPWNFPLVMFAWKVGPALACGNTVVLKTAEQTPLSALYAAKLFHEAGLPPGVLNIVSGYGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDDAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKGGIEQGPQIDSDQFEKILKYIRSGVESGATLETGGDRIGNKGFFIQPTVFSNVQDGMLIAKEEIFGPVQSILKFKDLGEVVQRANKTRYGLAAGVFTKNIDTANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGVYSLKNYLQVKAVVTPLKSPAWL 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3238g00002 530 FunFam Aldehyde dehydrogenase, putative 492 518 - -
Gabi3238g00002 530 FunFam Mitochondrial aldehyde dehydrogenase 2 302 491 - -
Gabi3238g00002 530 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 324 335 IPR016160 GO:0016491
Gabi3238g00002 530 CDD ALDH_F2BC 47 522 - -
Gabi3238g00002 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 302 491 IPR016163 GO:0016620
Gabi3238g00002 530 SUPERFAMILY ALDH-like 46 523 IPR016161 GO:0016491
Gabi3238g00002 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 64 520 IPR016162 GO:0016491
Gabi3238g00002 530 Pfam Aldehyde dehydrogenase family 58 520 IPR015590 GO:0016491
Gabi3238g00002 530 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 54 319 - -
Gabi3238g00002 530 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 296 303 IPR029510 GO:0016491
Gabi3238g00002 530 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 35 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3238g00002 Gabi-Chr3238 16015 20472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3238g00002 3 530 Aldehyde Dehydrogenase Gene Family AT3G48000 77.095 0.0 879