Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3235g00001 ATGGCCGTGCTTGGGATTGAAGAATTCCTTGTGGCGGTTCTTCTTTTTGTTTTAATCCATTTCTGGTGGCTCAACAGACACACACCCATCACTAAATGGCCCATTCTTGGAATGCTACCTAGTGTCTTGCTCAACGCGTCCACCATCCATGATTATGCCAATTCAGTTCTGAAACATCATGGTGGTAATTTCATGTTTGAAGGACCATGGCTAACAAACATGAACTTTTTTGTGACCAGCGACCCGATGAACGTGCAACACATCACAACCACAAAGTTTGAAAACTATGGTAAAGGGAATGATTTTAGAGACATTTTTGAAATCCTGGGAGATGGGATTTTCAGGTCTGATTCCGAGTTGTGGAAGTATAACAGAACTATACTTCATTCAATTTTTAAGCAGCCAAGTTTTCAGTTTTTTATTTACAAAACCATTCAGAAAAAGGTCGAGCATTCTCTACTTCCAGTTCTCGATCATGCATGGAAAGAAGGAATGCAGGTGGATTTACAAGATGTTTTTCAAAGGTTAACCTTCGACAACATCTGCTCCTTGGTTTTAGGATTCGATCCTAATTGCCTTTCAATTGAATTCCCAAATGTTGCATGTGAGAAAGCCTTCAATGAAGCAGAGGATGCACTGTTATACAGACATATCATGCCAAGATGCTTATGGAAGCTACTGAAATGGCTTCAAGTTGGGAAAGAAAAGAAGCTCAAAGAAAGCCAGAAAATTATTGACAAAATGTTATATGAAGAAATCATATCCAAACGCAAAATGCTTGGCGGTGGTACTGGTAGTAGTACCCTGGCTGATGAGTCAGGGTTGAACTTGCTAAATGCTCTTGCGAATGAAATAGGAAAGGGAAAAATTGATGACAAGTTTCTTAGAGACACAGCAGTGAATCTCCTTGCAGCTGGAAGAGACACAATTAGTGCAGGCCTCTCTTGGTTTTTCTGGCTCGTCTCAACACACCCATTTGTGGAAGCTAAGATTCTTGAAGAGATCAGAGAAAATTTACCAGAAACAGAAGGTGATTGGAAGGATTTAGGTGTGGAAAGTCTTAACAGGTTAGTTTATCTTCATGCAGCTATAAGTGAAGCCTTAAGGCTTTATCCTCCAATACCTTTTGAGCACAAATGTGCATTAAAATCTGATATTCTTCCTAGTGGTCATAGGATTAATTCAAATACCATGATAACGTACTCCCTGTACTCAATGGGGAGGGTAGAGGAAATATGGGGAGAAGATTGCTTGAAATTTAGACCAGAGAGATGGATTTCTAATAGAGGAGAGATTATTCATGTACCCTCTTACAAGTTCATTGCTTTCAACGCTGGACCAAGAAGTTGTTTGGGTAAGAATATAAGCTTCACTCAGATGAAGACTGTTGCTGTTGCTTTGTTGTTGAACTATCACATCCATGTGATGGAAGGCCATCCTATAATCCCTGGTGTTTCCGTTGTCCTGCATATGAAACATGGCTTGAAGATTATGCTGACAAAAAGAAGCATGTGA 1515 0.3987 MAVLGIEEFLVAVLLFVLIHFWWLNRHTPITKWPILGMLPSVLLNASTIHDYANSVLKHHGGNFMFEGPWLTNMNFFVTSDPMNVQHITTTKFENYGKGNDFRDIFEILGDGIFRSDSELWKYNRTILHSIFKQPSFQFFIYKTIQKKVEHSLLPVLDHAWKEGMQVDLQDVFQRLTFDNICSLVLGFDPNCLSIEFPNVACEKAFNEAEDALLYRHIMPRCLWKLLKWLQVGKEKKLKESQKIIDKMLYEEIISKRKMLGGGTGSSTLADESGLNLLNALANEIGKGKIDDKFLRDTAVNLLAAGRDTISAGLSWFFWLVSTHPFVEAKILEEIRENLPETEGDWKDLGVESLNRLVYLHAAISEALRLYPPIPFEHKCALKSDILPSGHRINSNTMITYSLYSMGRVEEIWGEDCLKFRPERWISNRGEIIHVPSYKFIAFNAGPRSCLGKNISFTQMKTVAVALLLNYHIHVMEGHPIIPGVSVVLHMKHGLKIMLTKRSM 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3235g00001 504 CDD CYP86A 64 495 - -
Gabi3235g00001 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Gabi3235g00001 504 PANTHER CYTOCHROME P450 22 496 - -
Gabi3235g00001 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 Gene3D Cytochrome P450 26 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 Pfam Cytochrome P450 31 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3235g00001 504 SUPERFAMILY Cytochrome P450 32 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3235g00001 Gabi-Chr3235 28316 29830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3235g00001 1 503 Cytochrome P450 AT2G23180 44.186 4.62e-167 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3235g00001 - - gmx:100785815 804.283