Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3233g00001 ATGTGGCTGGTGGGTTACAATGAAGGTGGTGAGTTCAACATGGCTGATTATGCATTCAATGGAAGGAAACTCAGGCCTCGACTCATGCCTAGGCCAATGACTTCACCTATCAACACTTCAACTACAAACACTCCTTGCTTGAGCCTCATTCATGACAATGATTTCTTTTCACAATATCACAATCTGGGTATGTTAGCAGAGCAGAGCAAGAGAGAGTTCAATAATACTCCACCAGTTGTGGTGAGTTCAAGGTGGAACCCTACCCCGGAGCAGCTAAGAGCATTGGAAGAGTTGTATAGAAAAGGGACAAGAACACCATCTGCAGAGCAAATCCAGCAAATAACTGCACAACTTAGAAGATTTGGAAAAATTGAAGGGAAAAATGTTTTCTATTGGTTTCAGAATCACAAAGCAAGAGAAAGGCAGAAGCGCCGCCGTCAAATGGAATCAGCTGCTGAGGGTCACCCCCGTGACTTTGATACTAAAAGAAAGACTTAG 498 0.4357 MWLVGYNEGGEFNMADYAFNGRKLRPRLMPRPMTSPINTSTTNTPCLSLIHDNDFFSQYHNLGMLAEQSKREFNNTPPVVVSSRWNPTPEQLRALEELYRKGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGHPRDFDTKRKT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3233g00001 165 Pfam Homeodomain 83 142 IPR001356 GO:0003677
Gabi3233g00001 165 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 67 153 IPR044555 GO:0003700|GO:0099402
Gabi3233g00001 165 ProSiteProfiles 'Homeobox' domain profile. 88 143 IPR001356 GO:0003677
Gabi3233g00001 165 SMART HOX_1 80 147 IPR001356 GO:0003677
Gabi3233g00001 165 MobiDBLite consensus disorder prediction 144 165 - -
Gabi3233g00001 165 Gene3D - 82 149 - -
Gabi3233g00001 165 FunFam WUSCHEL-related homeobox 4 82 149 - -
Gabi3233g00001 165 MobiDBLite consensus disorder prediction 139 165 - -
Gabi3233g00001 165 SUPERFAMILY Homeodomain-like 83 149 IPR009057 -
Gabi3233g00001 165 CDD homeodomain 84 144 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3233g00001 Gabi-Chr3233 18783 19406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3233g00001 1 153 Wox Gene Family AT3G18010 61.635 1.26e-55 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gabi3233g00001 Homeodomain 1.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3233g00001 - - gmx:100777274 265.774