Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3230g00004 ATGGGAGTGTTCACATTCGTGCTGCGCAAATCCGGTGGCGAATGGACGGCGAAACAGCATTCCGGCGATATTGAAGAGTCGTCTCCGTCGACCTTCGAGATCCAAAGGAAGCTCGTTAAGGCCGCTCTCGCCACCGATTCCTCCGGTGCTGTTCAGTCCTCTTTCTCTACTGTTTCCCCTTCCTCTGCCGTTTTCCAGGTGGTTGTGGGTGGTGCAGTATTTGTTGGAGGCGGTGTAGCTGCAGCAGCTGCTCCTGCAGGAGGTGCTGCTTCAGCTGGCGAGGCTGCCCCGGTTGCAGAGAAGAAAGAAGAAAAGGTTGAGGAAGAGGAGGAGGATGATGATTTGGGATTGTCACTCTTCGATTAG 366 0.5464 MGVFTFVLRKSGGEWTAKQHSGDIEESSPSTFEIQRKLVKAALATDSSGAVQSSFSTVSPSSAVFQVVVGGAVFVGGGVAAAAAPAGGAASAGEAAPVAEKKEEKVEEEEEDDDLGLSLFD 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3230g00004 121 MobiDBLite consensus disorder prediction 105 121 - -
Gabi3230g00004 121 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 121 IPR044252 GO:0003735|GO:0005840
Gabi3230g00004 121 Pfam 60s Acidic ribosomal protein 69 120 - -
Gabi3230g00004 121 MobiDBLite consensus disorder prediction 86 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3230g00004 Gabi-Chr3230 25515 27377 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3230g00004 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 66.667 8.15e-29 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3230g00004 K02942 - qsa:O6P43_022346 97.8265