LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi3225g00039	ATGGCTGCAAGTTCCCTCTACGTGTCCTTTCCCAGCTTCAAACTAAAGTTTATGTTGATTTTGATTACATGTCTTGTTGGGATAAGCTCTGCTCAGTTATCCAAGAACTTCTATCATAGAACATGTCCAAGAGCCCTTCCCACCATTAAGAAAGCAGTGGAGGATGCCGTGCGCCAAGAGCGTCGCATGGGTGCATCCTTGCTTCGACTCCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTATTGTTAGACGACACGGCAAATTTCACAGGGGAGAAGAATTCTTTTCCCAACGCTAACTCCCTTAGGGGATTTGACCTGATAGACAACATAAAATCTCAATTGGAAAGCTCTTGCCCTGGTGTTGTCTCTTGTGCTGACATCGTAGCTGTTGCTGCCAGAGATTCTGTTGCTGCTCTTGGTGGACCAAGATGGGAAGTAGCATTAGGCAGAAGAGATTCAACAACAGCAAGTTTAGAAGAATCTAATTCAGACTTACCTGCTCCCTTTTTGGATCTCAGTGGCCTCATCACTGCTTTCGCCAAGAAAGATTTCACAACCGAAGAAATGGTTACTTTATCAGGGGCTCACACAATAGGCCTAGTGAGGTGCAGTCTTTTCAGAGCTAGGATTTATAATGAGACCAACATAGATCCCTCATTTGCGACAGCAATGCAAAAAGTTTGTCCCTTCGAAGGTGGTGATAACAATTTCTCTCCTTTCGATTCAACCACTCCATTCATATTTGACAATGCTTACTACCAGAACTTGGTGAGGGAAAAGGGTCTTGTACACTCGGACCAACAACTCTTCGAGGATGGGTCAGGGCCCACAGACTCTCAAGTAGTTGAGTATAGCAAAGACATGGGACGTTTCAGAAAAGACTTTGCAGATGCAATGGTAAAGATGAGCATGCTAAGCCCACTAACTGGCTCCGACGGTCAGATCAGGCAAAACTGCAGGGTTGTCAATTCTCCAACTGAGGAAATAGACCATAAGACCCACAAATGA	1020	0.4471	MAASSLYVSFPSFKLKFMLILITCLVGISSAQLSKNFYHRTCPRALPTIKKAVEDAVRQERRMGASLLRLHFHDCFVQGCDASVLLDDTANFTGEKNSFPNANSLRGFDLIDNIKSQLESSCPGVVSCADIVAVAARDSVAALGGPRWEVALGRRDSTTASLEESNSDLPAPFLDLSGLITAFAKKDFTTEEMVTLSGAHTIGLVRCSLFRARIYNETNIDPSFATAMQKVCPFEGGDNNFSPFDSTTPFIFDNAYYQNLVREKGLVHSDQQLFEDGSGPTDSQVVEYSKDMGRFRKDFADAMVKMSMLSPLTGSDGQIRQNCRVVNSPTEEIDHKTHK	339

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi3225g00039	339	ProSiteProfiles	Plant heme peroxidase family profile.	32	327	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Gabi3225g00039	339	CDD	secretory_peroxidase	32	326	IPR033905	GO:0004601\|GO:0042744
	Gabi3225g00039	339	Gene3D	Peroxidase, domain 2	170	306	-	-
	Gabi3225g00039	339	ProSitePatterns	Peroxidases active site signature.	64	75	IPR019794	GO:0004601
	Gabi3225g00039	339	PRINTS	Plant peroxidase signature	42	61	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Gabi3225g00039	339	PRINTS	Plant peroxidase signature	243	258	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Gabi3225g00039	339	PRINTS	Plant peroxidase signature	191	203	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Gabi3225g00039	339	PRINTS	Plant peroxidase signature	259	276	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Gabi3225g00039	339	PRINTS	Plant peroxidase signature	66	86	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Gabi3225g00039	339	PRINTS	Plant peroxidase signature	125	135	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi3225g00039	Gabi-Chr3225	341893	344030	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi3225g00039	31	327	Peroxidase	AT5G05340	58.528	1.13e-126	364

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi3225g00039	K00430		-	gmx:100802244	515.383

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