Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3225g00031 ATGATCTCAAACACAGACCCTGCAGAACCAGCCACCGCGGCCATCGGAGCCGGCGTCGGCGCCACCGAAGCAAAATCCTCCGCTTCTTCCAATGAAGATAAGCCAGCACCGCCGGCAACACCAAACATTGTGATGTCCTCCAGGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGCTTTCTCTCTGGAGGTCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAAAGGTCTTCAATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGGACTGCAGAATACCTGAAAAATAATCTGTTTAAGAATTTGAGTAGCCATCCTGACTTTATCAAAGACACAAAGACCGCTATTGTTGAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAGGAAAAGGGGCATCATAGGGATGCTGGGTCCACTGCATCAACAGCTGTATTGTTGGGGGAGCGAATTCTTGTTGCTAATGTTGGTGATTCCAGAGTAGTTGCATGTAGAGCTGGTTCAGCTGTTCCTTTGTCTATTGATCACAAACCTGATAGATCTGATGAACGCCAACGGATTGAACAGGCTGGGGGATTCATAATTTGGGCAGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGATGGTGTAGATTTTATAATAATCGCTAGCGACGGTTTGTGGAATGTCATATCAAACCAGGAAGCCGTGTCTATAGTACAAAATATCACAGATGCAGAAGTGGCATCCAGAGAACTTATTAAAGAAGCTTATGCACGAGGAAGCTCAGACAACATCACTTGTGTTGTTGTTCGATTTGATTTATCCTGA 960 0.451 MISNTDPAEPATAAIGAGVGATEAKSSASSNEDKPAPPATPNIVMSSRDHDSLFSGGGISFLSGGRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHHRDAGSTASTAVLLGERILVANVGDSRVVACRAGSAVPLSIDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNQEAVSIVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3225g00031 319 Gene3D - 65 318 IPR036457 -
Gabi3225g00031 319 SMART PP2C_4 60 314 IPR001932 -
Gabi3225g00031 319 MobiDBLite consensus disorder prediction 1 47 - -
Gabi3225g00031 319 ProSiteProfiles PPM-type phosphatase domain profile. 71 316 IPR001932 -
Gabi3225g00031 319 FunFam probable protein phosphatase 2C 59 63 319 - -
Gabi3225g00031 319 SUPERFAMILY PP2C-like 65 317 IPR036457 -
Gabi3225g00031 319 CDD PP2Cc 70 316 IPR001932 -
Gabi3225g00031 319 ProSitePatterns PPM-type phosphatase domain signature. 102 110 IPR000222 GO:0043169
Gabi3225g00031 319 PANTHER PROTEIN PHOSPHATASE 39 316 IPR015655 GO:0004722|GO:0006470
Gabi3225g00031 319 Pfam Protein phosphatase 2C 72 309 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3225g00031 Gabi-Chr3225 273431 279710 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3225g00031 43 319 PP2C-type Phosphatase Gene Family AT1G43900 74.729 3.25e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3225g00031 K17506 - gmx:100776867 558.525