Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3225g00023 ATGGGAAAAATTTCAGGTTGGAATTTGCCATCAATACCGCAGTCACCACTGCTACCAGCATCATCGCCGCTGCCGCTGCCTCCACCGGTTCTGCCTGATGAATTCAAGAACCATATCAGAGAGTTGAACGGCAGCGACATTCAATTTGTGATGAGCAAGAAACTCTTCCAGACAGATTTGACCCCGAATCACGACCGTTTATCAATGCCGATGAAAGAAATTCGTTGTGATTTCCTCACTGAGGCTGAGAAGGCAACATTGAATGAGAGAGATTGCTCAAAAGGAAAACTTGTCGGAGTTGAAATGAAGGTGTTGGATCCATCTCTTAATGAGTTGACATTGTCGTTGAAGAAGTGGAACATGACAAGCACAAGCATCTACTGTCTCACCAAAAACTGGAAGAGTGTTGTCACCCATAACAGTTTGCAAAAAGGCGATCAACTGCAAATACGGTCTTTCAGAATGGATGGCAAATTACATTTTGTATTAAATAAACTCTGA 501 0.4291 MGKISGWNLPSIPQSPLLPASSPLPLPPPVLPDEFKNHIRELNGSDIQFVMSKKLFQTDLTPNHDRLSMPMKEIRCDFLTEAEKATLNERDCSKGKLVGVEMKVLDPSLNELTLSLKKWNMTSTSIYCLTKNWKSVVTHNSLQKGDQLQIRSFRMDGKLHFVLNKL 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3225g00023 166 CDD B3_DNA 53 165 IPR003340 GO:0003677
Gabi3225g00023 166 Gene3D - 29 166 IPR015300 -
Gabi3225g00023 166 SUPERFAMILY DNA-binding pseudobarrel domain 51 163 IPR015300 -
Gabi3225g00023 166 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 25 166 IPR005508 GO:0003677
Gabi3225g00023 166 Pfam B3 domain-containing protein At2g31720-like 37 138 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3225g00023 Gabi-Chr3225 213546 214046 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3225g00023 39 165 B3 DNA Binding Superfamily AT1G05930 30.233 4.59e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3225g00023 - - gmx:102663833 159.073