Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3225g00014 ATGGCAATGTATAGAATTGCAATTGGGACACCAGGAGAGGCTAGCCATCCTTCTGCAATTAGAGCAGCACTTGCAGAGTTCTTTTCTATGCTCATTTTTGTTTTTGCTGGCCAAGGCTCTGGCATGGCTTATAGCAAAATTACCAACAATGGACCTGCAACTCCTGATGGTCTCATAGTTGCATCATTATCTCATGCATTTGGACTTTTTGTGGCTGTGGCTGTTGGGGCAAACATTTCTGGTGGCCATGTGAACCCTGCTGTCACATTTGGTGCTTTCTTAGGAGGAAACATAACCTTGTTGAGAAGTATTTTGTATTGGATTGCACAGTTACTCGGTTCAGTTGTTGCTTGCATTCTTCTCAATTTCACCACTGGTGGAATGGAAACATCAGCTTTTTCTTTATCCTCTGGTGTGTCTGTCTGGAATGCACTAGTCTTTGAGATTGTGATGACTTTTGGGTTGGTATATACAGTTTATGCCACAGCAATAGACCCAAAGAGAGGGAATGTGGGTGTTGTTGCCCCAATAGCAATTGGTTTTGTTGTGGGTGCTAATATTTTGGTTGGTGGTGCTTTTGATGGTGCATCAATGAACCCAGCTGTGTCCTTTGGCCCTGCCATGGTTAGTGGGTCATGGACTCATCACTGGGTCTATTGGATTGGCCCATTCATTGGTTCAGCAACTGCTGCCATTCTCTATGATAATATCTTTATTGGTGATGATGGTCATCAACCCCTTTCAAATTCTGAAGTCTAG 759 0.4348 MAMYRIAIGTPGEASHPSAIRAALAEFFSMLIFVFAGQGSGMAYSKITNNGPATPDGLIVASLSHAFGLFVAVAVGANISGGHVNPAVTFGAFLGGNITLLRSILYWIAQLLGSVVACILLNFTTGGMETSAFSLSSGVSVWNALVFEIVMTFGLVYTVYATAIDPKRGNVGVVAPIAIGFVVGANILVGGAFDGASMNPAVSFGPAMVSGSWTHHWVYWIGPFIGSATAAILYDNIFIGDDGHQPLSNSEV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3225g00014 252 PANTHER AQUAPORIN-8 6 245 IPR034294 -
Gabi3225g00014 252 FunFam Probable aquaporin TIP1-1 4 251 - -
Gabi3225g00014 252 SUPERFAMILY Aquaporin-like 15 241 IPR023271 -
Gabi3225g00014 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3225g00014 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Gabi3225g00014 252 Pfam Major intrinsic protein 14 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3225g00014 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Gabi3225g00014 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3225g00014 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3225g00014 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3225g00014 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3225g00014 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gabi3225g00014 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3225g00014 Gabi-Chr3225 103440 104507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3225g00014 1 251 Major Intrinsic Protein MIP AT4G01470 78.486 1.85e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3225g00014 K09873 - gmx:100818197 447.588