Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3225g00007 ATGTCTTTTCAGAATAAAAACTTTTGGATGCCACGGGATGCTGGCTGCTTAGCTGAAGAAAATATGGGATATGAGAATTCTTCCAGAATTGAACCAAAGCGTGGTCATGGTGAACCAGAACTATTCAGCAACAACAAGAAGCAAGCTGTTGAAAGTGTTAGCGGCAGCCCAATTTCAGGAGTTTCACATATAAGTGTTTCTCCATGGGACACCAATTCGGGATTCCACTCAGTCACAGGTCAATTTTCTGACCGTCTCTTTGGATCTGAACTAAGGGCTGTCAATTTGGTTGATAAAAACATGCCATCAATTGCAAGTGGAAATCTGAACATGGGAAGAAGGGATTTTGAGAATCAATATGGTAATGATCCATCCGTGGGTTTATCAATATCTCATACCTTGGAGGACCCTTCATCATGTCTCAGTTTTGGTGGTATCAGAAAAGTCAAAGTTAATCAAGTCAGAGATTCTGAGAATTGCATGTCTTCATCCATGGGGCACTCTTATGGTAGGGCTGATAATAACACATTTTCAATAGGTGTTGGCTACAGTAAGAATGATGGCAACATATCATTGGGCCCAACTTCTAACAATGGAAATGATAATACCATATCTACTAGGACGACATTAAGTAAGACTGATGACAATCTTGTTTCAATGGGTCACACCTTCAACAAGGGGGATGGGAGCTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAATATCTTATCAATGAGTCAGGCCTTTGACAGGGGAGATGGAAATTTCATATCAATGGGTCAGTCATATGAAAAGGATGATAGCAATATGATATCTCTGGGTACCTCATACTACAAGGGGCATGAGAACTTTCTATCAATGGATCCAACCTATAGTAAATCAGGAGAAAATTTCATAACTATTGATGCTTCCTATGACAAGGGCATTGATCATATAATACCAATAGGTCCAACATATGATAAGGTGGATTCAAACATTGCATCAACAGTTCCTTCATATGACAAAAGAGATTCTAGCTCTTTAGCCGTGGACTACAACCACAATAAGGGTGAGGGAAGCACCATATCTTTTGGAGGTTTTCATGATGACCGGGAATCGAATCCCTCTGGAGGGATAATTAGTGGCTACGATCTATTGATGGGCAACCATACCTCAGCTGAAGGTTTGGATGGGGAGAAGGCTCTGACTCAGTCAAACTGTGAACTACCTGTAAATAGCAGTCCAAAATCTAATCTCAAAACTGATACTATCCTTAAGAATAAAGAGCCAAAGATAACCAAGAAGGCTCCTGTTAACAACTTCCCTTCAAATGTTAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCCTGTGAGATATGTTTCTTGGTCACGAGAGAGAGTTCATAAAGGATTCATAAAGGGAACTGGGTATTTGTGTTCGTGTGATGACTGCAAGCAGTCCAAGGCTCTCAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACCAAACACCCTAACAATCACATATACTTTGACAATGGAAAAACCATCTATGCTGTCGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAAGGTGACTGGCTCTATCATCAATCAAAAGAATTTTCGTATCTGGAAAGCATCATACCAAGCTGCTTCTCGGGAGCTTCAGCGTATCTATGGGAAGGATGAAGTGATCATACCATCTTGA 1728 0.4051 MSFQNKNFWMPRDAGCLAEENMGYENSSRIEPKRGHGEPELFSNNKKQAVESVSGSPISGVSHISVSPWDTNSGFHSVTGQFSDRLFGSELRAVNLVDKNMPSIASGNLNMGRRDFENQYGNDPSVGLSISHTLEDPSSCLSFGGIRKVKVNQVRDSENCMSSSMGHSYGRADNNTFSIGVGYSKNDGNISLGPTSNNGNDNTISTRTTLSKTDDNLVSMGHTFNKGDGSFMLMGHNYGKGDENILSMSQAFDRGDGNFISMGQSYEKDDSNMISLGTSYYKGHENFLSMDPTYSKSGENFITIDASYDKGIDHIIPIGPTYDKVDSNIASTVPSYDKRDSSSLAVDYNHNKGEGSTISFGGFHDDRESNPSGGIISGYDLLMGNHTSAEGLDGEKALTQSNCELPVNSSPKSNLKTDTILKNKEPKITKKAPVNNFPSNVKSLLSTGIFDGVPVRYVSWSRERVHKGFIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFDNGKTIYAVVQELKNTPQEMLFDAIQKVTGSIINQKNFRIWKASYQAASRELQRIYGKDEVIIPS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3225g00007 575 PANTHER AUTOIMMUNE REGULATOR 8 523 - -
Gabi3225g00007 575 SUPERFAMILY Porins 166 355 - -
Gabi3225g00007 575 Pfam Tify domain binding domain 468 523 IPR032308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3225g00007 Gabi-Chr3225 55028 59703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3225g00007 427 556 PHD Transcription Factor Family AT3G53680 53.846 5.21e-39 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3225g00007 - - gmx:100782217 919.842