Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3225g00005 ATGTCTTTTCAGAATAAAAACTTTTGGATGCCACGGGATGCTGGCTGCTTAGCTGAAGAAAATATGGGATATGAGAATTCTTCCAGAATTGAACCAAAGCGTGGTCATGGTGAACCAGAACTATTCAGCAACAACAAGAAGCAAGCTGTTGAAAGTGTTAGCGGCAGCCCAATTTCAGGAGTTTCACATATAAGTGTTTCTCCATGGGACACCAATTCGGGATTCCACTCAGTCACAGGTCAATTTTCTGACCGTCTCTTTGGATCTGAACTAAGGGCTGTCAATTTGGTTGATAAAAACATGCCATCAATTGCAAGTGGAAATCTGAACATGGGAAGAAGGGATTTTGAGAATCAATATGGTAATGATCCATCCGTGGGTTTATCAATATCTCATACCTTGGAGGACCCTTCATCATGTCTCAGTTTTGGTGGTATCAGAAAAGTCAAAGTTAATCAAGTCAGAGATTCTGAGAATTGCATGTCTTCATCCATGGGGCACTCTTATGGTAGGGCTGATAATAACACATTTTCAATAGGTGTTGGCTACAGTAAGAATGATGGCAACATATCATTGGGCCCAACTTCTAACAATGGAAATGATAATACCATATCTACTAGGACGACATTAAGTAAGACTGATGACAATCTTGTTTCAATGGGTCACACCTTCAACAAGGGGGATGGGAGCTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAATATCTTATCAATGAGTCAGGCCTTTGACAGGGGAGATGGAAATTTCATATCAATGGGTCAGTCATATGAAAAGGATGATAGCAATATGATATCTCTGGGTACCTCATACTACAAGGGGCATGAGAACTTTCTATCAATGGATCCAACCTATAGTAAATCAGGAGAAAATTTCATAACTATTGATGCTTCCTATGACAAGGGCATTGATCATATAATACCAATAGGTCCAACATATGATAAGGTGGATTCAAACATTGCATCAACAGTTCCTTCATATGACAAAAGAGATTCTAGCTCTTTAGCCGTGGACTACAACCACAATAAGGGTGAGGGAAGCACCATATCTTTTGGAGGTTTTCATGATGACCGGGAATCGAATCCCTCTGGAGGGATAATTAGTGGCTACGATCTATTGATGGGCAACCATACCTCAGCTGAAGGTTTGGATGGGGAGAAGGCTCTGACTCAGTCAAACTGTGAACTACCTGTAAATAGCAGTCCAAAATCTAATCTCAAAACTGATACTATCCTTAAGAATAAAGAGCCAAAGATAACCAAGAAGGCTCCTGTTAACAACTTCCCTTCAAATGTTAAAAGTTTGTTGTCAACTGGTATTTTTGATGGTGTTCCTGTGAGATATGTTTCTTGGTCACGAGAGAGAGTTCATAAAGGATTCATAAAGGGAACTGGGTATTTGTGTTCGTGTGATGACTGCAAGCAGTCCAAGGCTCTCAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACCAAACACCCTAACAATCACATATACTTTGACAATGGAAAAACCATCTATGCTGTCGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAAGCATCATACCAAGCTGCTTCTCGGGAGCTTCAGCGTATCTATGGGAAGGATGAAGTGA 1668 0.4065 MSFQNKNFWMPRDAGCLAEENMGYENSSRIEPKRGHGEPELFSNNKKQAVESVSGSPISGVSHISVSPWDTNSGFHSVTGQFSDRLFGSELRAVNLVDKNMPSIASGNLNMGRRDFENQYGNDPSVGLSISHTLEDPSSCLSFGGIRKVKVNQVRDSENCMSSSMGHSYGRADNNTFSIGVGYSKNDGNISLGPTSNNGNDNTISTRTTLSKTDDNLVSMGHTFNKGDGSFMLMGHNYGKGDENILSMSQAFDRGDGNFISMGQSYEKDDSNMISLGTSYYKGHENFLSMDPTYSKSGENFITIDASYDKGIDHIIPIGPTYDKVDSNIASTVPSYDKRDSSSLAVDYNHNKGEGSTISFGGFHDDRESNPSGGIISGYDLLMGNHTSAEGLDGEKALTQSNCELPVNSSPKSNLKTDTILKNKEPKITKKAPVNNFPSNVKSLLSTGIFDGVPVRYVSWSRERVHKGFIKGTGYLCSCDDCKQSKALNAYEFERHAGAKTKHPNNHIYFDNGKTIYAVVQELKNTPQEMLFDAIQKHHTKLLLGSFSVSMGRMK 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3225g00005 555 PANTHER AUTOIMMUNE REGULATOR 8 526 - -
Gabi3225g00005 555 Pfam Tify domain binding domain 468 523 IPR032308 -
Gabi3225g00005 555 SUPERFAMILY Porins 157 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3225g00005 Gabi-Chr3225 55028 59874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3225g00005 427 537 PHD Transcription Factor Family AT3G53680 55.856 2.46e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3225g00005 - - gmx:100782217 849.351