Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3221g00034 ATGGCACTAAATAAGACAGGAAAGTTGTTTGGTACCAACACTGGGGAGGACCCTGGCTTGTTTCCTCAAAACACCCGGCCAGAATTGCGCGGTGGTGTTGCAAATACAGGACAACAAATGCATAGTAATATCTCTCTACAGGCAGGGGAAGAATTTGCTGTGAATTTTGGTCATGATGGAATTGCTGCACGAAGAGTTCCTGTTTCACCTGATATACCTCGAAATCATGAGAATAGGGTTGGGTTGAATAGGGAGAGTGGCCCCGTGAGATATGAGGATCTTACAAATATTTTGGGGTTGAGGAGAATGGACTCTGAGTGTGCTTCTGACATATCAGACTTTGTCTCCATAAAACAGCCTGCACAGGAGATGGAAAATTGGGCTTCTGTTAACATTTTAAGCAAAATTCAAAAGGGAGATGGTGATAGTTGCCATGCATTGAGGAAGGCTGTTCGTGAATCAATTGGTGACCAACCTGGTATTGGGCCAGCTGTATCACCCCTTCTCAGATATGAATCTTCTCAGACCAATGGGTTTTCTGGTTCTGGAATTTTAGATGATTCTGTGTCTGGGAAAATGAAGTTTCTGTGCAGCTTTGGTGGAAAAATATTACCAAGGCCCAGTGATGGGAAACTCAGATATGTAGGGGGTGAGACACACATTATATCTATCCGAAAGGATATTTCATGGGAGGAGCTAGTGAAGAAGACCTTGGGTGTTTGCATTCAACATCACACAATCAAATACCAACTTCCTGGGGAGGATCTTGATGCTCTAATATCTGTTTCATCTGATGAGGACCTTCAAAATATGATAGAGGAATACCATGGGCTTGAAAGGCATGAAGGTTCTCAAAAGCTAAGAATTTTTTTGGTTCCTTTGGGTGAATCTGAAGAGACATCGTCAACAGAGGTGAGCACTGTTCAGCAGAGTGATCCTGATTACCAATATGTTGTTGCCGTGAATGGCATAGTAGACCCTAGTCCTAGGAAAAACATTGGTGGGCAGGGTTTGACAAATGAAACAAGTCAGTCTGTTGCAAGTTTGAATTTTGCTTCAGTTTTTCAAAAAACTTCTCCAAATGCCTCTTCTCCTTTGGAGATAAGGGATGGTATTAATGCTTTAAATCCAGATGGAATTCTGAATGATTCCCTTAATGTGCAAAGATCCTTCCCAATTTCTTCTACTCCAATTCAGGTAGCTGGTTCTGGCACAGGTTATGTACAATTGCTTGACAATAACTCATGCCAGGGAAGTCTTGAGAGCAACACATCATATATTACTGCTCAGCTACACCCTGAGAACTCCAGCATAAATACTGCTGATTGCAGATACCCTTATCAACATAAACACGGTGTTGTTGGTCAGCCCATGAAGCTCAATGAACGGCGTTTTGACAACTACAACCCAGAAAAAGAATTATTGACTCCTGTATATGTTAACCCAAGTGATGGTTACTGTGATGAAATTTTTGGGGGAGGGCCCTTGAATAAGGAAAGAAGATTCTACTCTGGAAATCCTCTTTCATGCTTGGATGATCCAATCTGTCAACATGCTGAGTCTTATGAAACTACTGACTCCCCTCATGGGATGCCTCATGCTTTTTCTGATTCACAGTTGCACGAGACTGGAGCAAGGTCTGGTTACACCTCACAAGAAGGAATTGGCCAATCTTTCTCCTGGAACCTGAAAAAGGCTCAATTACCTTCAACGTTACTCTCTAGTGTCTCGCAAGTGAACCTTATGGAGCATCAGCATGATTCCATTCTCTGTCATCCTCAAATGGAGTGTAAGATACCAAAAGTTGAGTCAGCTGAGATGCGAAGATGGCAAGATGTAGCATCTTCTTCTCCATATTCAGAATCATTAGGAATGAATGATCCTTTTCATAAGGATAGCATTTTAACTGAAAAGAAGTACCTTATTGCTCAAACTGACTTAAGAGGATCTACATTTGTAGCGAAGGATATTAAGGAAAGTTCTGTGAATTTAGAAAGGATGAAGATAATTGAAGAAAGGAATCCTATTCCCAAGAAGGATAGCAAGATTTATGAGGGGAAATCGTCTATCATGGATATGGGACATGGGACTGAATTGCATCTTTTGGACTCCTTCCCTGCTAATAACTTAAATGCTAATATTAATATGCAAAAGAATTGGGTACTACCTTCAAAGGATATAGTTCCCCCGTCATCAGGCATGATGGGACTCTCCCTAAAAAATCTTGCGGACAAGAACCCGTCTGATCTTCTTGGCTTGAGCCAAAGGACTAATGTTGGCAAGAAATGTACTTTGGCTGAAGGTCTGAATGGTGAACAAGGAATTGATTTTTCAGTGACCAGAAATTTTGATTTAAATGCTCCAATTTTAAAATGTGAAGAAAACTCTTTTGACAAAAGTTCTCTGGGAGGTCATACGTTTGAGCTGTCCATTGACCCAGATTATCTTGAATCTGCTCAAATTCAGCCTTCTAGTAATCTGATGGCTACAGGTTTTCTTGAAAATCCGATAGTAAGCTCTGCAATTTTGTATCCTCCTGTAATTCATGATAATCTTGGTCCAAGTTTAAACTTTCCTATGAATGGTCTGGATAATCCAAGCAAGAATATTTCTTTTAAAAAGGCACCTTTTCTGGATGACTTGACTGCCAGCACTGATCAAATGGTTGATCAGTTTATCCATGAACACTCTGCCTCTGGAAAGTCAAAAGTTGAAGATATAATGTCGGGACAATCTAAAAATTTAGAAAGGTGTAATGATGTAAACCCAGTGGAGCCATTTTTCATAGTAGAAGACGTGACTGGTGTTGTTCCTAAACATATTGAGTCTTCATTGGTAGGAACCTCACATATTGTGGATGAAGTTGGAAGTGATGTTGTATCCCCATCACCTACTGAAGCAGAGAGCATCATCCCTGAGTCTGATGAACCTGAGGATTTTAAAGACGATCAAACAGACAAGAGTGACTTCCTTTCTGATGCAATGATAGCAGAAATGGAAGCCAGCATATATGGTTTGCAGATAATAAGGAATGCTGATCTTGAAGAACTTACAGAGTTAGGATCTGGTACTTATGGAACTGTTTTTCATGGAAAATGGCGGGGAACAGATGTTGCTATAAAGAGAATCAAAAAGAGTTGCTTTGCAGGGAGAGCTTCTGAGCAAGAACGGTTGGCAAAAGACTTCTGGAGAGAGGCACATATCCTCTCAAATCTTCACCATCCCAATGTGGTCGCATTTTATGGAATAGTACCAGATGGGGCTGGTGGAACCTTGGCAACTGTAACCGAGTATATGGTCAATGGCTCCCTTAGGCATGTGCTTGTTAAGAAAGACAGATTACTGGATCGTCGTAAAAAGCTAATAATTGCAATGGATGCTGCTTTTGGTATGGAGTATTTGCACTCAAAAAATATTGTCCATTTTGATTTGAAATGTGACAATTTGCTTGTCAATCTAAGGGATCCACAACGACCCATATGCAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTTGTATCTGGGGGTGTGCGAGGAACCCTTCCATGGATGGCGCCGGAGCTGTTGAATGGTAGTAGCAACCGGGTTTCTGAAAAGGTTGACGTTTTCTCATTTGGCATCTCAATGTGGGAGTTATTGACAGGGGAAGAACCTTATGCAGATATGCATTGTGGTGCCATTATTGGGGGTATTGTAAAGAACACACTTCGACCACCTGTTCCAGAACGCTGTGATCCTGAATGGAGGAAGCTCATGGAAGAGTGTTGGTCACCGGACCCCGAAAGACGACCGTCATTCACAGAGATAACTGACAGGTTGAGATCTATGTCTATGGCCCTTCAAACTAAAGGGAATTATCAAGCATGGAAGTTAAGCCCCAATAGTGCTTCTTGA 3906 0.4135 MALNKTGKLFGTNTGEDPGLFPQNTRPELRGGVANTGQQMHSNISLQAGEEFAVNFGHDGIAARRVPVSPDIPRNHENRVGLNRESGPVRYEDLTNILGLRRMDSECASDISDFVSIKQPAQEMENWASVNILSKIQKGDGDSCHALRKAVRESIGDQPGIGPAVSPLLRYESSQTNGFSGSGILDDSVSGKMKFLCSFGGKILPRPSDGKLRYVGGETHIISIRKDISWEELVKKTLGVCIQHHTIKYQLPGEDLDALISVSSDEDLQNMIEEYHGLERHEGSQKLRIFLVPLGESEETSSTEVSTVQQSDPDYQYVVAVNGIVDPSPRKNIGGQGLTNETSQSVASLNFASVFQKTSPNASSPLEIRDGINALNPDGILNDSLNVQRSFPISSTPIQVAGSGTGYVQLLDNNSCQGSLESNTSYITAQLHPENSSINTADCRYPYQHKHGVVGQPMKLNERRFDNYNPEKELLTPVYVNPSDGYCDEIFGGGPLNKERRFYSGNPLSCLDDPICQHAESYETTDSPHGMPHAFSDSQLHETGARSGYTSQEGIGQSFSWNLKKAQLPSTLLSSVSQVNLMEHQHDSILCHPQMECKIPKVESAEMRRWQDVASSSPYSESLGMNDPFHKDSILTEKKYLIAQTDLRGSTFVAKDIKESSVNLERMKIIEERNPIPKKDSKIYEGKSSIMDMGHGTELHLLDSFPANNLNANINMQKNWVLPSKDIVPPSSGMMGLSLKNLADKNPSDLLGLSQRTNVGKKCTLAEGLNGEQGIDFSVTRNFDLNAPILKCEENSFDKSSLGGHTFELSIDPDYLESAQIQPSSNLMATGFLENPIVSSAILYPPVIHDNLGPSLNFPMNGLDNPSKNISFKKAPFLDDLTASTDQMVDQFIHEHSASGKSKVEDIMSGQSKNLERCNDVNPVEPFFIVEDVTGVVPKHIESSLVGTSHIVDEVGSDVVSPSPTEAESIIPESDEPEDFKDDQTDKSDFLSDAMIAEMEASIYGLQIIRNADLEELTELGSGTYGTVFHGKWRGTDVAIKRIKKSCFAGRASEQERLAKDFWREAHILSNLHHPNVVAFYGIVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDRRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWELLTGEEPYADMHCGAIIGGIVKNTLRPPVPERCDPEWRKLMEECWSPDPERRPSFTEITDRLRSMSMALQTKGNYQAWKLSPNSAS 1301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3221g00034 1301 Gene3D - 211 293 - -
Gabi3221g00034 1301 Gene3D Transferase(Phosphotransferase) domain 1 1102 1298 - -
Gabi3221g00034 1301 Pfam PB1 domain 209 293 IPR000270 GO:0005515
Gabi3221g00034 1301 Gene3D Phosphorylase Kinase; domain 1 1007 1101 - -
Gabi3221g00034 1301 CDD PB1_UP2 196 291 - -
Gabi3221g00034 1301 MobiDBLite consensus disorder prediction 956 984 - -
Gabi3221g00034 1301 Pfam Protein tyrosine and serine/threonine kinase 1017 1277 IPR001245 GO:0004672|GO:0006468
Gabi3221g00034 1301 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1007 1101 - -
Gabi3221g00034 1301 SUPERFAMILY CAD & PB1 domains 208 298 - -
Gabi3221g00034 1301 CDD STKc_MAP3K-like 1020 1277 - -
Gabi3221g00034 1301 SUPERFAMILY Protein kinase-like (PK-like) 1001 1276 IPR011009 -
Gabi3221g00034 1301 SMART PB1_new 207 294 IPR000270 GO:0005515
Gabi3221g00034 1301 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1102 1293 - -
Gabi3221g00034 1301 SMART serkin_6 1014 1283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3221g00034 1301 ProSiteProfiles Protein kinase domain profile. 1014 1284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3221g00034 1301 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1139 1151 IPR008271 GO:0004672|GO:0006468
Gabi3221g00034 1301 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 212 294 - -
Gabi3221g00034 1301 ProSitePatterns Protein kinases ATP-binding region signature. 1020 1045 IPR017441 GO:0005524
Gabi3221g00034 1301 PANTHER SERINE-THREONINE PROTEIN KINASE 237 1280 - -
Gabi3221g00034 1301 PRINTS Tyrosine kinase catalytic domain signature 1096 1109 IPR001245 GO:0004672|GO:0006468
Gabi3221g00034 1301 PRINTS Tyrosine kinase catalytic domain signature 1204 1226 IPR001245 GO:0004672|GO:0006468
Gabi3221g00034 1301 PRINTS Tyrosine kinase catalytic domain signature 1248 1270 IPR001245 GO:0004672|GO:0006468
Gabi3221g00034 1301 PRINTS Tyrosine kinase catalytic domain signature 1133 1151 IPR001245 GO:0004672|GO:0006468
Gabi3221g00034 1301 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3221g00034 Gabi-Chr3221 477402 486254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3221g00034 189 350 MAP Kinase Kinase Kinase AT1G16270 55.488 1.84e-43 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gabi3221g00034 PK_Tyr_Ser-Thr 2.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3221g00034 - - aprc:113862751 1867.43