Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3221g00023 | ATGGATCACTCACACTTCCTTCACCAACAACACCATCACCAACGCACAAGATACGCTACTCTACAACCTCAATCTCATCATCACAACCCTAACCACCTACCTCCGCCGCCTCTTCCTCCCCCTCCTCCCCCTCCCCCTCCTCAGACACTCTCATACCGCACCATCCGCACCCCTCCTCCTCCACCCTACAACAACCCTCAACCTCATCAATCCCAACAATTCCCTTTCAACTCCTCCACCAACCACCACATCCACGCCGCCTTCTCCAATCGGATCCTCTCCGATGACATCCTCCCCCGCCGTACCCTCCCTGATTTCGACCGCCGCAAACCTGAAACCTCCTGGAACCCTAGCCCCAGGGTCGTCCCCGATGATCGGCCGCTCAGGAGTTACCCTCCCGTCGATTTCGACCGGGAATTGCATCAGCATCAGCATCAGCATCAGCATCACCGTCCTCCTCCTCAGTCGTATCCGCCGATCGACAATCTCCGGTACGATCCGGAGGGTGGGACCTCGAGGTTGAGAATTGAGCGTGTGGAAGCCTACGATGGAAACCCTAGGGTGTGGGATAGAGGAGGCGATGGAAACTATCACCGCCGCGTGCTCGACGCGGAACCTGGCGGCGGCATGGGGGCGTCCAGGGAATCGGATATTGATTTGAAATCTGGTGGTTATGTTCGTGTGTATGGTGTGGAATGTGAGGATGAAGTGGCCACAAGGGGTGGCAGAGTTGAGAGCAAGAGGTGGGTGAATGATAGGAAGGGAATTAGAGAGTTGCATGATTCTTCTTCCTTTGAAGTGGGGAATAACGAGATTGGTGCTGCATCGAAACGAGAGTATTATGGTTCAGAAACGGCTAGGTATAATTACAGAGGGAACAGCAGGGACTCTGGTCATGAATTTACTCGCACTCCGCCTAAGAAGCAGATACAGAAGAAGAGTGCTCTTCTTAGACTTCAGACGGTAAAACCCAATCATAGGAACCGCGAGATTGAACAGTTACGTTATCCTGGCTATGCTCCTGATTCTAACTCTAATTTCTTCAGGGGTAGGGAGCACCAACATGGGTATTCAGGTCATGGGATGAAAGCAGAAGAGAGAGAGGGAAGCCCTGTCGACCTTGATATCTCATTCGAATCAAATTCCCTGGTGGCCAAAGCTATTGTGGCACCTTCAAGTTCGGCCCCTGTTTCGGATTCGAATATGAATCCTGTTTCTGATACATATTTGAGTTCTGCTGAGAAGAGTAAAAAGGTTTTCGTCTCTGAACTATCTACACCTGCTGTAAATTTAAATAGTTCACCAGGGAAAGCAAGTGACACCTCTAGTTCTGTCAAGGACTTGAGCCTGCAGAAGAATGTCCCCGATGTTTCTTCTCAGCCTAGCACCAGTGTGACCCATAATCCTCATGGGAAAAATGAGGTGCTGCATTCAGTTGGAAATACCAATAGTAAATCATCCCCAAGGGTTGTCAAGAAGAAAAAAATAATTGTCAAAAAACTGGTGAAGAAAGCTGCTATAAATCCTAATTCAACTGTGTCAAATTCACTATCAGCAAATGTGGTTTGTGGAACTGTGCAAGCAGATAGTGTCATACCTAGTTCATCAACTGCCTCTGGTCCTGACAAAACTAAAGGGAAAAGCACCGCTGTTGACAAGGTGCCTGTGGCTGACTGTTTGCACTCTTCACCAAACAAAGGGAATGTATTGACTGAAGATAAAAAGGGAGATATATCCCTTAGTTTGGGGCCACATTCCAGGTCACAGGAATGTAACACTGATGAAGATTCTGATATTGGGAAAGTATCCAGGTTTGAGAGAGGTGGAAACATTTCAAATTCTCCATCTCAGGCATCTAGTAGTGAATATAAAAAGAGTGATTCTTATTGTTTAGATGCAAATAATTCTGTTCTTGACTTGCCTAGCATGCCAAATACTGACAAGGTTACTGAATCATTAAATGGAAGTACTTTTTCAGAAATCAATCACATGGATTATGATAATAAGCAATTATGTCAGATTGAAGTGTCTCTATCACCTGGGAAATATTCAAATTTAGGATGCCCACAGAATAGCAATCTTGTGGACTTAGGGGATGAAATGAATTACAGATTTTTTAGTTCAGCTGACAGTACAACTAACACAGATCTTATAAATATAAGTAATTCTGCCAATGACAGGGTTTATGGCTTCAATTCCAATGATCTTACAAGTTCAAAAGAGATATTTATTGTTACTGACAGTGGGAATAATGGCACTGTTGGTAAGGCATATAGTGAAAATATGGCATCTACAATCCCTCAGTATGCTATTCTGGAAGAAAATTCAGATACAGCCATCCCTCTGCAAAGCAGTGGAATGGCTGCTTATTCAAGTTCAGGAAAAACTAGGATTCAAGATGGTCTTGATTGCCTACAACATGCCAGTGTACTGAAGCAGGGTTCTGATAGTGGAACATCTAATTTAGAAGATAGTATCACTGTTCACCATTATGGTGTCATGAACGATGCTGGAAAGCAGGTGTCCCCCCGTGATGTCACCATTACCCCTGAGAATTGTTACACAGAAGAAACTTTCCCAAAATCCAATATTTCAGTTGGGTCTGGCGAAGGGGTTACGAATAAGATAAAAAAGAGAACAGTTAGGACTCGAATAAAAATTTTGAGTTCAAAGATGGAGGGCATATCTCCAGACTGTGTAAATCCAGTTAGCCAAGCAAATGATGTTGATAGAGGCTCAAGTCTGTTGTTGAAGGATCCATGTCCTTCGGAAGTTATAGATCAACCTGTTCAAAGCTTATATTTTAACTCACAGCCCAGTTTGGATGGGGTCAATGCTTTACATGGGAAAAGGCGGTTTTTAGAGGCTAAATTTCATGTTGGAAATAATGACTCTGATGAAGCAAATAAGGTTTCATCAGTTTCTAAAAGGAAAAAAGTCACTTCTAGTCACCCAAATTTCACTCAAAGTCAATCTGAATTCAGCGATGCTATTGTGGCTTCCACATCTAGTTCAGAAGTTCCTATCAGTTTCAGTGATAACCAAGCACATCAGAAAGAAGAAGTTGCATTGTCAAGCATGGGTATTCTGTCCACTGCTCAGTCTATGCCTTATTCAGAGGATATTGCTAAATTGTCTGACAATATATTGGCTGTAGGATCTTTTGAGTCTATGGATGTAAATAGGGAAACAACGAGTTCTGAGCATTTGGAATTGCAGCCCTCAGATATTGTCTCTTGTTCATTGTGTGAGGACTTGGCCTCTCCAAATGTTCAGCTCTCATTGGTGGAAGGTGAGCAGAAAGAAATTATTACTCCAATTGTGCCTATAAGTAATATTCAAACTGACATTATGGTGATTGGAAATATTACGGGAGAAAAGAATGATTTACAGGCTGTTGAAGAAAGTTTCCAGTATAGAGACTTTATGCAAAGGTCTCCAAGTGCTGATATGGAATCTAATGATCTTAATGTGAAGGATGATTTACTTGCTCTGCAGAACCTTATGTCGTGTCCTCCTGATGTTGATGGTGTCACTACCAGTAATTCAAATGATGAATTGATTGAGGATGTGCCTGATGCATTATCAGATATGTGTTCTCAAGGTATGCAATCTGAAGTACCTGATAGAGGGATTTTAGAATTTACAGCAATCCATGATGAAAACATTTGTGGGGATGAAGAAAATCTGGATGAGATATCTATGAGCTCTGACTTACATACGTCATCAATACAGCATCCTAGAAAAGTTATGAAGTCAGATCATGCAATTGGATGTAGTGACCCAATCGTGAGGAAGATAATGCCACAACCATCCCAAGTTTACTCCAAAGTTACAGCTAAGGGTCTAAATTCACATTATTCAGAATTAAATATGAGCAAAAATCAGCCTGGTGGTGTCATTCCTAAAACTTTCCAGGGTCATTCTTTCACCTTTTCAAAGTCAAAGACAAAGACATCTGCCTCCTCAACCCAAATATCTATACCTCGAACTTGGCATCGTACATGGAATAATTCTCCTGCTTCTCTACCTGGAATCAAGCCTTCGGTAGGTACAGTTCCTCCCAAAAGGCCAATTCTAGAAGGGAAAGGGAACTTTCAGAATACTTCTTACGTTCGTAAAGGTCACAGTCTCGTAAGGAAACCTACTCAAGTTTCTGCTTTACCTCAAATCTCCTCTGCTAATCAGTCACCTTCCTTGGGCTTAGGTCAAATCCCAAAGAGCACCAGATCTAAAAACAGGGCTGATATGACAGATCAACCAATCTACTTGAAAACAGAAGTAACAAATGTGCCTCTCGAGAGGCAGAGAACACCTCCACTATCCGTTGACACCAAACCAGAGGAAAATATATCTTCCCCATTGGTAGAACCTCCTTCCAGTGGTTGCTGTGAAAATGCATCAGAACCTAGGAAATTTGTGGAAACTAAAGATGCACTGAATCATTATGAAACTCCTGAAAATCAATCTGGTCCATCTAATAATGGGGAAAGCGAAGTTGAAGCGAATGATGGGAATATTTCTTCTTTGAACACCAAGAGAATAGTATATGTAAAGCCCAAAACAAATCAATTGGTTGCAACCTCAAATTCTTGTGATGTTTCTGTCTCTACTGATGACAAGGGCCAAACAGCTTTCTCCGATGGCTACTACAAGAGGAGCAAAAATCAATTGGTTAGGACTACATTTGAAAGTCATATCAACCAGACAGTTGCAATGCCCAATAGTAATGTAAATTCTGATGGGCAAGGGGCTAGTAAGGTTCTTTGCAACAGGAGGTTTAGTAAGAGGCGGTCACATAAGGTTGCTGGAAGTTCATGTAAACCTTCAAGAGCCTCATTAGTCTGGACCCTTCGTGGCAAAAATTCATCCAAAAATGACAGGGACTCATGGCATTATCAGAAGGTTTTACCTCACTTGTTTCCATGGAAAAGAGCAATATATTTAAGGAGCTTCATTCATAGTTCTGCTTCAAGCTTCAATAGTAGTTCCTTATCTTCAATCAGCAAGAAATTGCTTCTGCTGAGAAAGAGGGATACTGTTTACACTAGATCGACCCATGGGTTCTCTCTTTGGAAATCCAAGGTATTAGGTGTTGGTGGGTCTAGTTTAAAATGGTCCAAATCCATTGAGAAGCACTCAAAGCAAGCTAATGAGGAAGCTACACTTGCCGTTGCTGCAGTAGAGAGGAAGAAGAGAGAGCAGAAAGATGCAGTTTGCATCAGTTCTCAGGCAAAGAGAGAACGAATATTTCGTATTGGTTCAGTTCGCTACAGAATGGATCCTTCCAGGCGGACACTTCAAAGGATTTCAGACGATGAATCCATGTCCTCTGCCTCTATCTGTTCAGGTTTGGCTGCCAAAAGAGCTTACATTCCGAGGAGATTAGTGATTGGAAATGATGAATATGTCCGAATTGGCAATGGTAACCAGCTTATTAGGGACCCGAAGAAACGAACTAGAAAATTGGCTAATGAAAAAGTTAGATGGAGCTTGCACACAGCCAGACAGCGGTTGGCTCGAAAGCAGAAGTATTGTCAGTTTTTTACTAGATTTGGGAAGTGTAACAAGGATGGAGGGAAGTGTCCTTATATTCACGATCCCTCTAAAATTGCTGTCTGTACTAAGTTCCTGAATGGTTTATGCTCTACTCCCAACTGCAAATTGACTCATAAGGTTATTCCAGAGAGAATGCCCGACTGTTCTTATTTTTTACAAGGCTTATGCAGTAACAGAAATTGTCCATACAGACACGTCAATGTGAACCCTAAAGCATCTATTTGTGAAGGATTTCTTAAGGGTTATTGTGCAGATGGGAATGAGTGTCGGAAGAAGCACAGCTATGTCTGTCCTAGTTTTGAAGCAACAGGAACCTGTACTCATGGAACGCAATGCAAGCTTCATCATCCCAAAAAACAAAGCAAGGGAAAGAAAAGAAAGAGATCTGGAGATCAGAACAGCAGTAGAGGGCGTTACTTTGGTTCTATCCCTGTTGATGTTTCTGAACCTCGGATGATGATGGCTCTAATGCAAATTCAACATAATGATGACCTTGAAGGAGAACTTTCCGACTACATCAGCCTCGATGTTAATGAAGAAGTTGCAGACACTGCTGATCAATCATTCGAGCAAGCAACATTGTGTGACAATGATTCCTTGGATTCACAGTTGGATAATTGGGATGATCTTATTAAACCAGTTCTTATAATGAAAACAAAATTCACGCCGCAACAATCTTAG | 6240 | 0.4237 | MDHSHFLHQQHHHQRTRYATLQPQSHHHNPNHLPPPPLPPPPPPPPPQTLSYRTIRTPPPPPYNNPQPHQSQQFPFNSSTNHHIHAAFSNRILSDDILPRRTLPDFDRRKPETSWNPSPRVVPDDRPLRSYPPVDFDRELHQHQHQHQHHRPPPQSYPPIDNLRYDPEGGTSRLRIERVEAYDGNPRVWDRGGDGNYHRRVLDAEPGGGMGASRESDIDLKSGGYVRVYGVECEDEVATRGGRVESKRWVNDRKGIRELHDSSSFEVGNNEIGAASKREYYGSETARYNYRGNSRDSGHEFTRTPPKKQIQKKSALLRLQTVKPNHRNREIEQLRYPGYAPDSNSNFFRGREHQHGYSGHGMKAEEREGSPVDLDISFESNSLVAKAIVAPSSSAPVSDSNMNPVSDTYLSSAEKSKKVFVSELSTPAVNLNSSPGKASDTSSSVKDLSLQKNVPDVSSQPSTSVTHNPHGKNEVLHSVGNTNSKSSPRVVKKKKIIVKKLVKKAAINPNSTVSNSLSANVVCGTVQADSVIPSSSTASGPDKTKGKSTAVDKVPVADCLHSSPNKGNVLTEDKKGDISLSLGPHSRSQECNTDEDSDIGKVSRFERGGNISNSPSQASSSEYKKSDSYCLDANNSVLDLPSMPNTDKVTESLNGSTFSEINHMDYDNKQLCQIEVSLSPGKYSNLGCPQNSNLVDLGDEMNYRFFSSADSTTNTDLINISNSANDRVYGFNSNDLTSSKEIFIVTDSGNNGTVGKAYSENMASTIPQYAILEENSDTAIPLQSSGMAAYSSSGKTRIQDGLDCLQHASVLKQGSDSGTSNLEDSITVHHYGVMNDAGKQVSPRDVTITPENCYTEETFPKSNISVGSGEGVTNKIKKRTVRTRIKILSSKMEGISPDCVNPVSQANDVDRGSSLLLKDPCPSEVIDQPVQSLYFNSQPSLDGVNALHGKRRFLEAKFHVGNNDSDEANKVSSVSKRKKVTSSHPNFTQSQSEFSDAIVASTSSSEVPISFSDNQAHQKEEVALSSMGILSTAQSMPYSEDIAKLSDNILAVGSFESMDVNRETTSSEHLELQPSDIVSCSLCEDLASPNVQLSLVEGEQKEIITPIVPISNIQTDIMVIGNITGEKNDLQAVEESFQYRDFMQRSPSADMESNDLNVKDDLLALQNLMSCPPDVDGVTTSNSNDELIEDVPDALSDMCSQGMQSEVPDRGILEFTAIHDENICGDEENLDEISMSSDLHTSSIQHPRKVMKSDHAIGCSDPIVRKIMPQPSQVYSKVTAKGLNSHYSELNMSKNQPGGVIPKTFQGHSFTFSKSKTKTSASSTQISIPRTWHRTWNNSPASLPGIKPSVGTVPPKRPILEGKGNFQNTSYVRKGHSLVRKPTQVSALPQISSANQSPSLGLGQIPKSTRSKNRADMTDQPIYLKTEVTNVPLERQRTPPLSVDTKPEENISSPLVEPPSSGCCENASEPRKFVETKDALNHYETPENQSGPSNNGESEVEANDGNISSLNTKRIVYVKPKTNQLVATSNSCDVSVSTDDKGQTAFSDGYYKRSKNQLVRTTFESHINQTVAMPNSNVNSDGQGASKVLCNRRFSKRRSHKVAGSSCKPSRASLVWTLRGKNSSKNDRDSWHYQKVLPHLFPWKRAIYLRSFIHSSASSFNSSSLSSISKKLLLLRKRDTVYTRSTHGFSLWKSKVLGVGGSSLKWSKSIEKHSKQANEEATLAVAAVERKKREQKDAVCISSQAKRERIFRIGSVRYRMDPSRRTLQRISDDESMSSASICSGLAAKRAYIPRRLVIGNDEYVRIGNGNQLIRDPKKRTRKLANEKVRWSLHTARQRLARKQKYCQFFTRFGKCNKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPERMPDCSYFLQGLCSNRNCPYRHVNVNPKASICEGFLKGYCADGNECRKKHSYVCPSFEATGTCTHGTQCKLHHPKKQSKGKKRKRSGDQNSSRGRYFGSIPVDVSEPRMMMALMQIQHNDDLEGELSDYISLDVNEEVADTADQSFEQATLCDNDSLDSQLDNWDDLIKPVLIMKTKFTPQQS | 2079 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 965 | 988 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 1389 | 1411 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 102 | 161 | - | - | |
Gabi3221g00023 | 2079 | FunFam | zinc finger CCCH domain-containing protein 3 | 1870 | 1921 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 531 | 550 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 1483 | 1507 | - | - | |
Gabi3221g00023 | 2079 | SMART | c3hfinal6 | 1840 | 1868 | IPR000571 | GO:0046872 | |
Gabi3221g00023 | 2079 | SMART | c3hfinal6 | 1922 | 1948 | IPR000571 | GO:0046872 | |
Gabi3221g00023 | 2079 | SMART | c3hfinal6 | 1869 | 1893 | IPR000571 | GO:0046872 | |
Gabi3221g00023 | 2079 | SMART | c3hfinal6 | 1949 | 1971 | IPR000571 | GO:0046872 | |
Gabi3221g00023 | 2079 | SMART | c3hfinal6 | 1895 | 1920 | IPR000571 | GO:0046872 | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 29 | 68 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 288 | 312 | - | - | |
Gabi3221g00023 | 2079 | FunFam | Zinc finger CCCH domain-containing protein 7 | 1923 | 1984 | - | - | |
Gabi3221g00023 | 2079 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1944 | 1972 | IPR000571 | GO:0046872 | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 1389 | 1467 | - | - | |
Gabi3221g00023 | 2079 | Coils | Coil | 1718 | 1738 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 607 | 625 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 555 | 625 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 22 | 78 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 428 | 487 | - | - | |
Gabi3221g00023 | 2079 | Gene3D | - | 1868 | 1922 | - | - | |
Gabi3221g00023 | 2079 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1840 | 1869 | IPR000571 | GO:0046872 | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 428 | 491 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 293 | 307 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 1443 | 1459 | - | - | |
Gabi3221g00023 | 2079 | ProSiteProfiles | Zinc finger C3H1-type profile. | 1895 | 1921 | IPR000571 | GO:0046872 | |
Gabi3221g00023 | 2079 | PANTHER | CCCH ZINGC FINGER | 297 | 2072 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 1965 | 1979 | - | - | |
Gabi3221g00023 | 2079 | Gene3D | - | 1923 | 1986 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 589 | 603 | - | - | |
Gabi3221g00023 | 2079 | MobiDBLite | consensus disorder prediction | 1963 | 1995 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3221g00023 | 1846 | 1975 | C2H2 Transcription Factor Family | AT2G32930 | 31.618 | 4.93e-06 | 49.3 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Gabi3221g00023 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3221g00023 | - | - | lja:Lj1g3v0268620.1 | 2392.85 |