Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3220g00018 ATGGCTGATACAGTCGCTCTGGAAGCTGATCCCACCCAGCTTGATGTCAAGCTCTTCAATAGGTGGAGCTTCGACGATGTTCAGGTTACTGACATCTCTCTGGCTGATTATATTGGAGTTGTGCCATCCAAGCATGCAACCTATGTTCCTCACACTGCTGGTAGGTACTCGGTCAAGCGTTTCAGGAAAGCCCAGTGTCCTATTGTTGAGAGGCTCACCAACTCTCTCATGATGCACGGTAGAAACAATGGGAAGAAACTCATGGCTGTGAGGATTATTAAGCATGCGATGGAAATTATCCATTTGCTGACTGATCAGAATCCCGTTCAAGTTATTGTTGATGCTGTCATCAACAGTGGTCCCCGTGAAGATGCTACTCGAATTGGCTCTGCTGGAGTTGTTAGGAGACAGGCTGTGGATATCTCGCCTCTTCGCCGTGTTAATCAGGCAATCTATCTTCTAACCACAGGTGCACGTGAAGCTGCTTTCAGAAATATTAAGACCATTGCTGAATGCTTGGCCGATGAACTTATTAACGCAGCAAAAGGTTCATCCAACAGCTATGCTATCAAGAAAAAGGATGAGATAGAGAGAGTCGCCAAGGCCAATCGTTAA 615 0.4618 MADTVALEADPTQLDVKLFNRWSFDDVQVTDISLADYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPVQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3220g00018 204 Gene3D Ribosomal protein S7 domain 1 204 IPR036823 -
Gabi3220g00018 204 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 204 IPR000235 GO:0006412
Gabi3220g00018 204 NCBIfam 30S ribosomal protein S7 16 204 IPR005716 GO:0003735|GO:0006412|GO:0015935
Gabi3220g00018 204 CDD uS7_Eukaryote 17 204 IPR005716 GO:0003735|GO:0006412|GO:0015935
Gabi3220g00018 204 FunFam 40S ribosomal protein S5 1 204 - -
Gabi3220g00018 204 SUPERFAMILY Ribosomal protein S7 17 204 IPR036823 -
Gabi3220g00018 204 PANTHER RIBOSOMAL PROTEIN S7 14 204 IPR000235 GO:0006412
Gabi3220g00018 204 Pfam Ribosomal protein S7p/S5e 58 204 IPR023798 -
Gabi3220g00018 204 ProSitePatterns Ribosomal protein S7 signature. 70 96 IPR020606 GO:0003723|GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3220g00018 Gabi-Chr3220 128407 131129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3220g00018 1 204 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 87.440 7.72e-136 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3220g00018 K02989 - gmx:100305898 377.481