Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3220g00008 ATGGGCGCCAATTCTATGCTATCCGAGTCGACTCACGATCTCGACGAGCAGATCTCACAGCTCATGCAGTGCAAGCCACTCTCCGACCAACAGGTTAGAGTTTTATGTGAGAAGGCTAAGGAGATTTTAATGGATGAAAGTAATGTCCAGCCTGTGAAAAGCCCTGTGACAATTTGTGGTGATATCCATGGGCAGTTCCATGATCTTGCTGAGCTATTTCGAATTGGAGGGAAGTGTCCAGATACTAACTACTTGTTTATGGGTGATTATGTGGACCGGGGTTATTATTCAGTTGAGACTGTTACACTCCTTGTGGCACTGAAAGTGAGGTATCCTCAGCGAATTACTATTCTCAGAGGAAACCATGAAAGCCGTCAGATTACTCAAGTATATGGATTTTACGATGAATGCCTACGAAAGTATGGTAGTGCTAATGTTTGGAAGATCTTTACAGACCTTTTTGACTATTTTCCATTGACTGCGATCGTTGAATCAGAAATATTCTGTTTGCATGGTGGACTGTCACCTTCAATTGAGACCCTTGATAACATAAGGAACTTCGATCGGGTTCAAGAGGTTCCTCATGAAGGGCCCATGTGTGATCTATTGTGGTCTGACCCAGATGACAGGTGTGGCTGGGGAATTTCTCCCCGTGGCGCGGGATATACTTTTGGCCAGGATATATCTGAACAATTCAATCACACAAACAGCCTTAAGTTGATTGCTAGAGCTCATCAGCTGGTTATGGATGGATTTAACTGGGCTCATGAACAAAAGGTGGTTACCATTTTTAGTGCACCTAACTATTGTTACCGATGTGGGAACATGGCTTCCATATTGGAGGTTGATGATTGCAAGGGCCACACATTTATTCAGTTTGAACCTGCTCCGAGGAGAGGAGAACCTGATGTCACCCGAAGAACGCCTGATTACTTTCTATAA 942 0.4395 MGANSMLSESTHDLDEQISQLMQCKPLSDQQVRVLCEKAKEILMDESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKIFTDLFDYFPLTAIVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNSLKLIARAHQLVMDGFNWAHEQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQFEPAPRRGEPDVTRRTPDYFL 313
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi3220g00008 313 FunFam Serine/threonine-protein phosphatase 6 313 - -
Gabi3220g00008 313 SMART pp2a_7 27 297 IPR006186 GO:0016787
Gabi3220g00008 313 SUPERFAMILY Metallo-dependent phosphatases 10 298 IPR029052 -
Gabi3220g00008 313 Pfam Calcineurin-like phosphoesterase 55 246 IPR004843 GO:0016787
Gabi3220g00008 313 Gene3D - 6 313 IPR029052 -
Gabi3220g00008 313 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Gabi3220g00008 313 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 12 313 IPR047129 GO:0004722
Gabi3220g00008 313 CDD MPP_PP2A_PP4_PP6 13 297 - -
Gabi3220g00008 313 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Gabi3220g00008 313 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Gabi3220g00008 313 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Gabi3220g00008 313 PRINTS Serine/threonine phosphatase family signature 181 208 IPR006186 GO:0016787
Gabi3220g00008 313 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Gabi3220g00008 313 PRINTS Serine/threonine phosphatase family signature 152 178 IPR006186 GO:0016787
Gabi3220g00008 313 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi3220g00008 Gabi-Chr3220 57871 64732 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3220g00008 19 243 Calmodulin-binding Proteins AT5G63870 34.831 5.15e-33 122