Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi321g00001 ATGAATGAGGCTGATGGTAGAGTAACTGAGGTAAAGAATGTTCACCGGACTAGTGTAGCAGCCAGTGATAAAGAAAATGGATTATTTTTTGGAAGCTTCACAAGCTTCCACAAGCAGCCAGTGATTTTGAACTTGACGGGTTTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGAGTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTTAGACATCCATGGATATCTTTCTACACAGAACGTACATTGAAGATCCTGCCCGTTGAATCAAAGTTGAAGCACCAAAATGGAGCTGCTTGCCACAACTTTGTTGCTGCACCTGAACCTAGGTTAGGAAGAAACAGGATGGATGATGGGTTCCTTAATGAGGTTTCAAGCCTTTCTTCATCATCTGAAAGTTGCAATTCAGAATATCATGATGTTTGTGTGTGGATTGATGCACTTGCCAATGCAATTTCACATGTAAGGATATCTGAACCAAAGAGGAGCAAGTTGTGGGCAGTTCCAATTCATCAGCAAGGTTTATATAACATGAGGGCTAACCTCTGTAAAGCATTTTGA 771 0.4254 MNEADGRVTEVKNVHRTSVAASDKENGLFFGSFTSFHKQPVILNLTGLAGSPAYVAPEVLLGRYSEKADIWSAGVLLHALLVGVLPFKGDSQEAVFEAIKNSKLEFQTGMWESISKPARDLVGRMLTRDISARITADEVLRHPWISFYTERTLKILPVESKLKHQNGAACHNFVAAPEPRLGRNRMDDGFLNEVSSLSSSSESCNSEYHDVCVWIDALANAISHVRISEPKRSKLWAVPIHQQGLYNMRANLCKAF 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi321g00001 256 Pfam Protein kinase domain 31 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi321g00001 256 SUPERFAMILY Protein kinase-like (PK-like) 30 183 IPR011009 -
Gabi321g00001 256 ProSiteProfiles Protein kinase domain profile. 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi321g00001 256 SMART serkin_6 6 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi321g00001 256 Gene3D Transferase(Phosphotransferase) domain 1 21 175 - -
Gabi321g00001 256 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi321g00001 Gabi-Chr321 10190 12340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi321g00001 45 145 EF-hand Containing Proteins AT4G35310 50.495 1.47e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi321g00001 Pkinase 7.2e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi321g00001 - - gmx:100809977 298.516