Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3217g00044 ATGGTCTACCCAGGTTCAATGCAATTGTCTCGTGACGTTAGGCTCAACAGTAATAGCGGGTTCCGTAGTTTCCGTCATAATCCTATGGGGGTTGGTCGATTACATTTGGTCACCATAAATCTTTCAACATGTAGATTGAAGCAAGATTCTTCAGCACTCCATCTTTTTAGAGTACATGCCCCAATACGGCATGTGCCTTCCAGATGTAATGTTTTCGTATGCCGGTCTGTCCTAACACCAGGTGGAGGGAATGTGAATCTGCTCATGAAATCTGCTACTGTTTTTTTAACAAGGTCATATGATGCTTTATGTGGAAGCCCTATTTGGCTTCGATTGATCCCAGCCCTTGGTATCATTGCCTTTGCTGTTTATGGTCTTGAGCCGCTCATTCGTCTCAGCAGGACCCTATTTCTTCAAAGGAATGACAGTAGTTGGAAGAAAAGTAGTTCGCGATATATGATGACATCTTATTTTCAGCCATTGCTGTTATGGACTGGGGCAATGCTCATATGCAGGGCATTAGATCCACTAGTCCTACCATCTGAGACCAGCCAGGTTGTGAAGCAAAGGCTGCTTAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCTTAATTCAACAAGCACAAAAATTCTTTCTGGAGGCAAATGACTCTGGTGATGCAAGAAATATGGGCCTTGATTTTGCTGGGAAAGCAGTGTATACTGCTGTATGGGTTGCCGCCTTGTCATTGTTCATGGAGTTGCTAGGTTTCTCCACACAGAAGTGGTTAACTGCTGGTGGTTTGGGCACAGTATTGCTCACTCTTGCAGGTCGTGAGATATTTACAAACTTTCTTTCAAGTATAATGATCCATGCAACTCGGCCATTTATTCTGAACGAGTGGATTCAAACAAAGATTGAAGGTTATGAGGTTTCTGGTACTGTTGAGCATGTAGGCTGGTGGTCACCAACTATTGTGAGAGGTGATGATCGTGAGGCAGTTCATATTCCTAATCACAAATTCACTGTAAATGTTGTGAGAAATCTGAGTCAGAAATCTCATTGGCGTATCAAGAGTTACGTTGCTATCAGTCACTTGGATGTCAACAAAATTAACAGTATTGTGGCTGATATGCGCAAGGTTTTGGCTAAAAATCCTCAAGTAGAGCAGCAAAAATTACACAGAAGGGTGTTTTTGGAGAATGTCAATCCTGAAAATCAGGCTCTTATGATATTAATATCTTGCTTTGTAAAAACTTCACATTTTGAAGAGTACCTCTGCGTTAAGGAGGCAATTCTTTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCTCGGCTAGCCACTCCCATCCGCACAGTTCAGAAAATATATGGTGAGGCTGACTCAGAAAATATACCCTTTGGGGACACCATTTTCACTCGATCCAGAGCAACAGCAAATCGTCCATTCCTACTGATAGAACCACCATATAAAGTTAATGGAGAAGATAAAGTTAAGCCTTCAACTCGTTCAACTCGAGCAAATGAGGAAAAGGATGCCAAGGTTGATGAAATTGTGGCATCTGACTCGAAAGGAGAAGAGAATTTTGCAGCTACATCAACCTCCCAACCTGGTGTAAACTCCAAGGATAAATCCAAGTCAATTTCTGAGGCCCAAATCCAGAATATTGGTTCTGATAGTTCAGTTGAGAAGACCTCCAAAACCATGCCGCCTAAAAAGGAAAGTACAGGAGATGCAGGAAAGGGAAGTACAGTTCCAGTATCTAAAAACCTTGCACAAAGTGCTGTGCCTGAAACCTCTCCTGTTACTTCCCATGAGAATATGGGTTCTGATAGTTCAGTTGAGAAGACCTCCAAAACCATGCAGCCTAAAAAGGAAAGTGCAGGAGATGCAGGAAAGGGAAGTACGGTTAATGTATCTAAAAACCTTGCACAAAGTGCTGTGCCTGAAACTTCTCCTGTTACTTCCCAAGAGTCTGGCAGGGGAGAGACCGGTTCTACTTCTTCACATTCAAAGCAAGATGAAGAGAAATCTGCTGTGTCTTCATCATCAGTTAGACCTTCCTTGGAAGAGAATATTCTTCTTGGTGTTGCCCTAGAAGGCTCAAAGCGAACTCTTCCAATTGAGGAAGAAATGACTCCATCTCCTATCCCTGTGGAGTCACAAGAATTTGCTGTACAACGGAATGGGAGTGGACCTCCTGCTAACAAGGATAAGAAGGATGGTCAGATGTCTTCATTTCCAACTGCTAACAAGGATAAGAAGGATTAG 2277 0.4242 MVYPGSMQLSRDVRLNSNSGFRSFRHNPMGVGRLHLVTINLSTCRLKQDSSALHLFRVHAPIRHVPSRCNVFVCRSVLTPGGGNVNLLMKSATVFLTRSYDALCGSPIWLRLIPALGIIAFAVYGLEPLIRLSRTLFLQRNDSSWKKSSSRYMMTSYFQPLLLWTGAMLICRALDPLVLPSETSQVVKQRLLNFVRSLSTVISFAYCLSSLIQQAQKFFLEANDSGDARNMGLDFAGKAVYTAVWVAALSLFMELLGFSTQKWLTAGGLGTVLLTLAGREIFTNFLSSIMIHATRPFILNEWIQTKIEGYEVSGTVEHVGWWSPTIVRGDDREAVHIPNHKFTVNVVRNLSQKSHWRIKSYVAISHLDVNKINSIVADMRKVLAKNPQVEQQKLHRRVFLENVNPENQALMILISCFVKTSHFEEYLCVKEAILLDLLRVVSHHRARLATPIRTVQKIYGEADSENIPFGDTIFTRSRATANRPFLLIEPPYKVNGEDKVKPSTRSTRANEEKDAKVDEIVASDSKGEENFAATSTSQPGVNSKDKSKSISEAQIQNIGSDSSVEKTSKTMPPKKESTGDAGKGSTVPVSKNLAQSAVPETSPVTSHENMGSDSSVEKTSKTMQPKKESAGDAGKGSTVNVSKNLAQSAVPETSPVTSQESGRGETGSTSSHSKQDEEKSAVSSSSVRPSLEENILLGVALEGSKRTLPIEEEMTPSPIPVESQEFAVQRNGSGPPANKDKKDGQMSSFPTANKDKKD 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3217g00044 758 MobiDBLite consensus disorder prediction 635 669 - -
Gabi3217g00044 758 Pfam Mechanosensitive ion channel 238 445 IPR006685 GO:0016020|GO:0055085
Gabi3217g00044 758 SUPERFAMILY Sm-like ribonucleoproteins 281 351 IPR010920 -
Gabi3217g00044 758 Gene3D - 297 352 IPR023408 -
Gabi3217g00044 758 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 2 749 IPR045042 -
Gabi3217g00044 758 MobiDBLite consensus disorder prediction 496 758 - -
Gabi3217g00044 758 Gene3D - 191 295 - -
Gabi3217g00044 758 MobiDBLite consensus disorder prediction 528 567 - -
Gabi3217g00044 758 MobiDBLite consensus disorder prediction 496 525 - -
Gabi3217g00044 758 MobiDBLite consensus disorder prediction 583 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3217g00044 Gabi-Chr3217 457105 464003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3217g00044 1 728 Mechanosensitive Ion Channel Family AT1G58200 51.822 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3217g00044 K22047 - gmx:100796022 1098.57