Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3217g00034 ATGAAAGGAGAATATGTAGAGCAACATGTTCCTAACAATGAAACGCCAACTATGTTCTCAAAGCTTCCCCAACAACAACAACAACAACAATCTCAACAACCTCAGCACCATTCATTTTCTCACAACCCTTTCCAACTCTCCGGGGAGGACGATAACCGCAATAGCGGCGGCGCCACCCCCATCACCGTGCAGAAGCCTAACTCCTCCGGCGACGGAGCCACCATTGAGGTCGTGAGGCGCCCTAGGGGTCGTCCACCCGGATCGAAAAACAAACCTAAGCCACCAGTTATCATAACCCGCGACCCCGAACCTACCATGAGCCCTTACATTCTCGAAGTTTCTGGCGGGAACGACGTCGTCGAAGCCATCGCACGGTTCAGTCGACGCAAGAACATGGGCCTCTGCATACTAACGGGTTCTGGAACAGTCGTTAACGTCACTCTCCGTCAACCCTCCACAACGCCTGGAGCCACCGTTACTTTTCACGGCCGTTTCGATATCCTCTCCGTATCCGCAACCTTCCTTCCCCAACAATCGGGTGCTTCGCCGATGGGTCCTAACGGATTTTCAATCTCTCTCGCCGGACCGCAGGGCCAGATCATTGGAGGGATTGTCGCCGGCGAATTGATGGCTGCGGGGACGGTGTTCGTGATAGCCGCTTCGTTCAACGACCCATCGTATCACAGGCTGCCGCCGGAAGAAGAGGCTCGAAACTCCGTCTCCGGCGGCGATGGACATTCACCGCCTGTCTCCGGTGGCGGCGGCGGCGAAAGTGGGCATGGCCCGGCGGAGTCGTGTGGAATGTCCATGTACAGCTGTCACTTGCCATTGGATGTGATTTGGGCTCCAACAGCAAGACCACCACCACCACCACCGTACTGA 882 0.5612 MKGEYVEQHVPNNETPTMFSKLPQQQQQQQSQQPQHHSFSHNPFQLSGEDDNRNSGGATPITVQKPNSSGDGATIEVVRRPRGRPPGSKNKPKPPVIITRDPEPTMSPYILEVSGGNDVVEAIARFSRRKNMGLCILTGSGTVVNVTLRQPSTTPGATVTFHGRFDILSVSATFLPQQSGASPMGPNGFSISLAGPQGQIIGGIVAGELMAAGTVFVIAASFNDPSYHRLPPEEEARNSVSGGDGHSPPVSGGGGGESGHGPAESCGMSMYSCHLPLDVIWAPTARPPPPPPY 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3217g00034 293 SUPERFAMILY AF0104/ALDC/Ptd012-like 105 235 - -
Gabi3217g00034 293 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 265 IPR014476 GO:0003680
Gabi3217g00034 293 MobiDBLite consensus disorder prediction 10 71 - -
Gabi3217g00034 293 ProSiteProfiles PPC domain profile profile. 103 243 IPR005175 -
Gabi3217g00034 293 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 223 IPR005175 -
Gabi3217g00034 293 MobiDBLite consensus disorder prediction 1 103 - -
Gabi3217g00034 293 Gene3D - 107 241 - -
Gabi3217g00034 293 FunFam AT-hook motif nuclear-localized protein 107 241 - -
Gabi3217g00034 293 CDD DUF296 108 222 IPR005175 -
Gabi3217g00034 293 MobiDBLite consensus disorder prediction 227 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3217g00034 Gabi-Chr3217 330645 331526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3217g00034 1 290 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 62.876 1.04e-104 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3217g00034 - - gmx:100815772 405.986