Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3217g00024 ATGGCTTTGGAAAACCTAAGCAGGGATCAGTGCGTGTACCTGGCCAAGCTGGCGGAGCAGGCGGAAAGGTACGAGGAGATGGTGGAGTTCATGCAGAAGCTGGTGGTGGGGTCCACCCCTTCGTCGGAGCTGAGTGTGGAAGAGAGGAACCTGTTGTCCGTGGCGTATAAGAACGTGATTGGGTCACTCAGAGCGGCGTGGCGGATTGTGTCGTCGATAGAGCAGAAGGAGGAGGGTCGTAAGAACGACGAACACGTGGGTCTCGTGAAAGGCTACAGATCCAAGGTGGAATCGGAGTTATCCGATGTGTGTGCCAGTATTCTGAACCTTTTGGACTCGAATCTCATACCCTCTGCTTCTGCCGGCGAATCGAAGGTTTTCTATTTGAAAATGAAAGGAGATTATCATAGGTATATGGCAGAGTTTAAGGTTGGGGATCAAAGAAAAACTGCTGCTGAGGATACTATGTTGTCTTACAAGGCTGCCCAGGACATTGCTTATGCGGATCTACCCCCTACTCATCCTATACGATTGGGTTTGGCCCTTAACTTTTCTGTGTTCTACTACGAAATTCTCAACCAGTCTGATAAAGCATGTGGTATGGCTAAACAGGCTTTTGAGGAAGCAATTGCTGAGCTGGACACCTTGGGAGAAGAATCCTACAAGGACAGCACCCTTATAATGCAACTTTTAAGAGACAACCTCACCCTTTGGACTTCTGATGTCCAGGACCAGCTAGATGAGCCCTGA 750 0.492 MALENLSRDQCVYLAKLAEQAERYEEMVEFMQKLVVGSTPSSELSVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNDEHVGLVKGYRSKVESELSDVCASILNLLDSNLIPSASAGESKVFYLKMKGDYHRYMAEFKVGDQRKTAAEDTMLSYKAAQDIAYADLPPTHPIRLGLALNFSVFYYEILNQSDKACGMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDVQDQLDEP 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3217g00024 249 Pfam 14-3-3 protein 14 239 IPR023410 -
Gabi3217g00024 249 SMART 1433_4 8 248 IPR023410 -
Gabi3217g00024 249 SUPERFAMILY 14-3-3 protein 7 241 IPR036815 -
Gabi3217g00024 249 ProSitePatterns 14-3-3 proteins signature 2. 221 240 IPR023409 -
Gabi3217g00024 249 PIRSF 14-3-3 3 248 IPR000308 -
Gabi3217g00024 249 Gene3D - 1 248 IPR036815 -
Gabi3217g00024 249 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 -
Gabi3217g00024 249 Coils Coil 14 34 - -
Gabi3217g00024 249 ProSitePatterns 14-3-3 proteins signature 1. 49 59 IPR023409 -
Gabi3217g00024 249 FunFam 14-3-3 protein epsilon 5 249 - -
Gabi3217g00024 249 PRINTS 14-3-3 protein zeta signature 92 116 IPR000308 -
Gabi3217g00024 249 PRINTS 14-3-3 protein zeta signature 185 211 IPR000308 -
Gabi3217g00024 249 PRINTS 14-3-3 protein zeta signature 43 72 IPR000308 -
Gabi3217g00024 249 PRINTS 14-3-3 protein zeta signature 123 145 IPR000308 -
Gabi3217g00024 249 PRINTS 14-3-3 protein zeta signature 158 184 IPR000308 -
Gabi3217g00024 249 PRINTS 14-3-3 protein zeta signature 212 241 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3217g00024 Gabi-Chr3217 218967 221683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3217g00024 5 243 14-3-3 family AT5G10450 87.029 5.17e-156 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3217g00024 K06630 - qsa:O6P43_019580 451.825