Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3217g00009 ATGACATTCAAGCGTCGGAATGGAGGTCGCAACAAGCATGGTCGTGGCCATGTCAAATTCATCCGATGCTCCAACTGCGGCAAATGCTGCCCAAAAGACAAATCAATCAAGAGGTTCCTTGTGAGGAACATCGTGGAACAAGCTGCTGTCCGCGATGTTCAGGAGGCTTGCGTCTACGAGCAATACACACTTCCAAAATTGTATCTTAAGATGCAATATTGTGTTTCTTGTGCTATCCACTCTCATGTTGTAAGAGTTAGATCAAGAACTGATAGGAGGAAGCGTGAGCCTCCACAACGCTTCATCAGGCGCAGGGATGATGCGCAAAGGCCTGGTCAACCTGGTCAAGCACCTCGTCCTACTGGTGTTGGAGCTCCTGCTCGAACATAA 390 0.4872 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYLKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDAQRPGQPGQAPRPTGVGAPART 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3217g00009 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Gabi3217g00009 129 Gene3D Ribosomal protein S26e 1 115 IPR038551 -
Gabi3217g00009 129 MobiDBLite consensus disorder prediction 86 129 - -
Gabi3217g00009 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 122 IPR000892 GO:0003735|GO:0005840|GO:0006412
Gabi3217g00009 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Gabi3217g00009 129 MobiDBLite consensus disorder prediction 90 110 - -
Gabi3217g00009 129 FunFam 40S ribosomal protein S26 1 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3217g00009 Gabi-Chr3217 50287 51928 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3217g00009 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 82.759 3.82e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3217g00009 K02976 - gmx:100784958 240.35