Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3215g00036 ATGTTGTGCGCTTGCTCCTCCGGGGAGCAATTCAAATTTGAAGAGCCGCCACCGCAGTCGCCGGAGTCTCTCGCAACAAGGGATTTCTCTGCCAGTGGACTTTCTTCGAGGAATGCGGATTGGGAATCGAAGTTTGATGAAACCCAAGTAGAAGAAGTTGAATCTACTCTAAAAGAAGCACTTTCCTTAAACTATGAGGAAGCAAGGGCCCTGCTGGGGAGGCTTGAATACCAAAGAGGGAATTTTGATGCTGCCCTCCAAGTATTTCAAGGTATAGACATCAAGGGTTTGACCCCAAGGATGATCAGGGCAATTGCTGAAAGAACCAAGCAAAGAAAACCACGTTCCAAGGCAGATATCGTGATTCCAAATGTGATGTCATTGCATTCAGTAAGCCTGCTTCTTGAGGCAATTTTGCTTAAAGCAAGATCATTAGAGGAGCTTGGGCGATACATTGAGGCTGCAAAGGAGTGCAGAATAATTCTGGATACGGTTGAATCTGCCTTTCCTAATGGAATGCCCGAGAGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCCATAGAGCATTGCAGTTGCTTCCGAGCCTATGGATCAAGGCAGGCTTTCTAGATGAAGCTGTCACTGCATATCGTCTTGCTCTGGTCAAGCCATGGAATTTGGAACAACGAAGGTTGGCTGGTGTACAAAAAGATTTAGCTACAATGCTACTCTATGGTGGTGTTGAAGTAAGCCTACCCTCTCAGTTGCAAGTGTGGGGTCAAACAACACCCATGAGTAACGTTGAGGAAGCAATACTTTTGCTATTAATACTCATGAGCAAAGTAGCAATTCAGAAAATAGAGTGGGATGCTGAAATAATGGATCATCTTACATTTGCACTTTCAGTTACTGGGTTGTTTGAGCCATTGGCAGATCATGTAGAGCAGATCCTTCCAGGTATCTATAGTCGAGTTGAGAGGTGGTACTTTCTTGCTCTATGTTATAGTGCAGCAGGGCATAATGAAGCAGCATTGAACCTTTTGAGGAAGGCTTGTGGTAGTTCTGAAGCAAAGCATAGACTCCATTTTCCTTCATTTTTGTTTGGAGCTAAACTTTGTTCCCAACATCCTGGCCATGCTCGTGAAGGCATTAACTTTTCACATGAAGTTATCAATCTAGCTAAGTACCAAAATGAGCATTTTTTGAGTCAAGGATACAAGTTTCTTGGCGTTTGCTATGGGGCTGCAGCTAGAACTTCTGTACTTGATTCTGAAAGAAGTATGTTTCAAAGAGAGTCTTTGAACTTTCTAAACTGTGCTGCTGTATATGGAAATGGTGACCCGGATGTGATATTCAGCCTTGGACTGGAGAAAGCAATTCAAAGGAATCTGGATGGAGCTTATGACAATATAATGATGTACTCAGACGCGACTGTTGGTAGTTCAGGAAGAGGTTGGCAGTTGTTAGCACTCATAGTATCCGCACAGCAGCGGTTCAAGGATGCTGAAACTATAATTGATTTTGCTTTAGATGAGGCTGGAAGGATGGATCAGCTAGAACTTCTAAGATTGAAAGCAGTACTTCAAATTGCTCAGCAGGAACCCAAGCAAGCAATAGAGACCTACAGAATCTTGCTAGCACTAATTCAAGCAAGAAAAGAGCTTTGGCTTCAAGATAAGAACTTTGATCAAGCAAAAGCATTCAGGCATGAGTTGGAAATGGAAGCCTGGCAGGATTTGGCTAGCATTTATGCAGATGTTGGTTCCTTGCTTGATGCAAAAGCTTGTGTTAACAAAGCCCAGTTGATAGATTTTTTCTCTCCAAGAAGCTGGCATATTACAGGGTTGTTGTTTGAAGCTCAATCATTATACAAACAGGCATTTGTTTCCTTTTCAGTATCATTGTCGATAGAACCAGATTACGTTCCCAGTATCATTTCAACTGCAGAATTGTTGCTGAAACTTGGTTTGCAATCACTTCCAATTGCAAGAAGCTTTTTAATGAATGCTTTGCGATTAGAACCCACAAACCACAATGCTTGGTTCAACCTCGGATTGATTTCGAAAACAGAAGGTTCATTACAGCAAGCAGCTGATTTCTTTCAAGCTGCATACGAACTGAAGCTTTCGGCTCCAGTGCAAAAATTTGAGTAA 2136 0.4228 MLCACSSGEQFKFEEPPPQSPESLATRDFSASGLSSRNADWESKFDETQVEEVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTPRMIRAIAERTKQRKPRSKADIVIPNVMSLHSVSLLLEAILLKARSLEELGRYIEAAKECRIILDTVESAFPNGMPESIGEDCKLQEMFHRALQLLPSLWIKAGFLDEAVTAYRLALVKPWNLEQRRLAGVQKDLATMLLYGGVEVSLPSQLQVWGQTTPMSNVEEAILLLLILMSKVAIQKIEWDAEIMDHLTFALSVTGLFEPLADHVEQILPGIYSRVERWYFLALCYSAAGHNEAALNLLRKACGSSEAKHRLHFPSFLFGAKLCSQHPGHAREGINFSHEVINLAKYQNEHFLSQGYKFLGVCYGAAARTSVLDSERSMFQRESLNFLNCAAVYGNGDPDVIFSLGLEKAIQRNLDGAYDNIMMYSDATVGSSGRGWQLLALIVSAQQRFKDAETIIDFALDEAGRMDQLELLRLKAVLQIAQQEPKQAIETYRILLALIQARKELWLQDKNFDQAKAFRHELEMEAWQDLASIYADVGSLLDAKACVNKAQLIDFFSPRSWHITGLLFEAQSLYKQAFVSFSVSLSIEPDYVPSIISTAELLLKLGLQSLPIARSFLMNALRLEPTNHNAWFNLGLISKTEGSLQQAADFFQAAYELKLSAPVQKFE 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3215g00036 711 MobiDBLite consensus disorder prediction 23 39 - -
Gabi3215g00036 711 Pfam Tetratricopeptide repeat 673 702 IPR019734 GO:0005515
Gabi3215g00036 711 Pfam Tetratricopeptide repeat 320 349 IPR019734 GO:0005515
Gabi3215g00036 711 SUPERFAMILY TPR-like 568 702 IPR011990 GO:0005515
Gabi3215g00036 711 ProSiteProfiles TPR repeat profile. 672 705 IPR019734 GO:0005515
Gabi3215g00036 711 Gene3D Tetratricopeptide repeat domain 439 706 IPR011990 GO:0005515
Gabi3215g00036 711 Gene3D Tetratricopeptide repeat domain 41 345 IPR011990 GO:0005515
Gabi3215g00036 711 SMART tpr_5 568 601 IPR019734 GO:0005515
Gabi3215g00036 711 SMART tpr_5 477 510 IPR019734 GO:0005515
Gabi3215g00036 711 SMART tpr_5 602 635 IPR019734 GO:0005515
Gabi3215g00036 711 SMART tpr_5 135 168 IPR019734 GO:0005515
Gabi3215g00036 711 SMART tpr_5 319 352 IPR019734 GO:0005515
Gabi3215g00036 711 SMART tpr_5 513 546 IPR019734 GO:0005515
Gabi3215g00036 711 SMART tpr_5 672 705 IPR019734 GO:0005515
Gabi3215g00036 711 SUPERFAMILY TPR-like 67 542 IPR011990 GO:0005515
Gabi3215g00036 711 Coils Coil 58 78 - -
Gabi3215g00036 711 PANTHER PROTEIN NPG1 1 711 IPR043376 -
Gabi3215g00036 711 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3215g00036 Gabi-Chr3215 418474 421536 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3215g00036 1 710 Calmodulin-binding Proteins AT1G27460 59.944 0.0 850