Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Gabi3215g00027 | ATGGACGACGCATTTGCAAGATCTATTCCTGAGGTCCTTGATTTCTTTGGAGTGGACCCGACAAAGGGTCTATCTGATATTCAGGTGGCACAACATTGTAGACTTTATGGTTCAAACGTGCTGCCCGAAGATCAAAGAGCTCCTTTTTGGAAATTGGTTTTGAAGCAATTTGATGATTTGCTTGTGAAGATACTAATTGCAGCTGCGCTTATATCTTTTGTCCTGGCATTATTTAACGGAGAAACAGGCTTGATGGCATTTCTGGAGCCTTCTGTCATTCTGATGATATTGGCTGCAAATGCAGCTGTGGGAGTGATTACAGAAACAAATGCTGAAAAAGCTCTTGAGGAGCTACGTGCCTATCAAGCTGATGTGGCAACTGCTTTGCGAAATGGTTGTTTTTCCATACTTCCTGCAACAGAACTGGTTCCTGGGGACATTGTGGAAGTTTCTGTGGGGTGCAAAATTCCTGCTGATATGAGGATGATCGAGATGCTAAGTAATCAAGTGCGTGTTGATCAAGCTATTCTTACAGGTGAGAGCTGTTCCGTGGAAAAAGAGCTTAAAACTACGACAACAACAAATGCTGTATACCAAGACAAAACGAATATTCTGTTCTCGGGAACAGTTATGGTTGCTGGTAGGGCAAGAGCTGTGGTGGTTGGAGTTGGTCATAACACTGCCATGGGCAGCATACGTGATTCTATGTTGCGAACAGAGGATGAGGTGACACCATTGAAAAAGAAGTTGGACGAGTTTGGTACCTTTTTGGCCAAGGTTATTGCAGGGATTTGCATATTGGTGTGGATTGTAAACATTGGTCACTTTCGTGATCCTTCGCATGGTGGTTTCTTGCGCGGTGCAATTCACTATTTTAAGATTGCAGTTGCTCTGGCAGTTGCAGCAATTCCTGAAGGGCTCCCTGCTGTTGTTACTACGTGTTTGGCTCTTGGAACAAAGCGTATGGCCAGGTTGAACGCCATTGTTCGCTCTTTGCCATCCGTTGAAACCTTGGGCTGCACCACTGTAATTTGCAGTGACAAAACTGGGACTCTAACTACCAATATGATGTCAGTTGCGAAGGTATGTGTTGTTGAATCTGCAAAACGTAGTCCTGTTGTTACCGAATACAGTGTCAGTGGAACTACATATGCACCTGAAGGCATAATCTTTGACAGTAGAGGGATGCAGCTTGACTTTCCAGCTCAATTGCCATGTCTTCTTCACATAGCAATGTGTTCTGCTCTTTGCAATGAATCAACCCTGCAGTATAATCCTGATAAAGGGAAGTATGAAAAAATTGGTGAGTCAACTGAAGTGGCACTACGTGTCTTGGCAGAAAAGGTTGGTCTCCCTGGTTTTGATTCTATGCCATCAGCCTTGAATATGTTGAGCAATCTTGAACGAGCTTCTTACTGTAACCATTACTGGGAGGAACAATTTAGAAAGGTGTATATTTTGGAATTTTCTCGAGATCGAAAAATGATGAGTGTGCTTTGTGGCCGAAACCAGTTGCATGTTTTGTTCTCAAAGGGTGCTCCAGAAAGTATAGTTTCTAGATGTACAACCATTCTGTGCAATGATGATGGTTCCATTGTGCCACTTACTGCTGATATTCGAGCAGAGCTGGACTCAAGGTTCCACAGTTTTGCAGGAAAAGAAACCTTGAGATGCCTAGCTTTAGCCCTGAAATGGATGCCCTCAGTTCAACAGACGTTGTCCTTTGATGATGAGAAAGATCTTACGTTTATTGGGTTGGTTGGGATGCTGGATCCACCAAGAGATGAAGTAAGAAATGCCATGCTTTCATGTATGACTGCTGGCATACGTGTTATAGTTGTCACTGGAGATAACAAGTCCACTGCTGAGTCGCTTTGCCACAAAATAGGTGCTTTTGACCATTTGATAGATTTTGCTGAACATTCTTACACTGCTTCTGAGTTTGAAGAACTCCCAGCACTGCAACAAACTATAGCATTGCAACGTATGGCACTTTTTACCAGGGTTGAGCCTTCTCATAAAAGAATGTTGGTTGAAGCATTGCAGCACCAGAATGAAGTGGTTGCAATGACGGGTGATGGAGTCAATGATGCACCTGCTCTGAAGAAGGCAGATATCGGAATTGCTATGGGTTCAGGGACAGCTGTTGCCAAGAGTGCTTCGGACATGGTGCTGGCTGATGACAACTTTGCTTCAATCGTTGCAGCTGTGGCAGAGGGAAGGGCCATATACAACAATACAAAACAGTTTATTAGATATATGATTTCTTCCAATATTGGCGAAGTTGTCTGTATATTTGTGGCTGCTGTGCTTGGAATACCTGATACCCTGGCCCCTGTCCAGTTGCTTTGGGTCAATTTGGTTACTGACGGATTGCCTGCCACTGCTATTGGCTTCAATAAGCAAGACTCTGATGTGATGAAGGCTAAGCCTCGAAAGATGAATGAAGCGGTTGTTACAGGTTGGCTCTTCTTTCGTTATTTAGTAATTGGAGCTTATGTTGGGCTTGCCACTGTTGCTGGTTTTATTTGGTGGTTTGTCTATTCTGATAGTGGCCCTAAACTACCCTATACTGAATTGATGAATTTTGACACTTGCGCAACCAGGGAGACAACTTATCCATGCAGTATATTTGATGATCGACATCCATCTACTGTATCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTTTGAACAATCTTAGTGAAAATCAATCTCTTGTGGTCATCCCTCCCTGGAGTAACTTGTGGCTTGTTGCTTCTATAATCCTAACTATGCTTCTTCACATTCTGATTTTATATGTTCACCCACTGTCAGTTCTTTTCTCTGTAACACCATTATCATGGGCTGACTGGATGGTTGTCCTCTATCTTTCACTACCTGTTATAATCATTGATGAGGTGTTAAAGTTCTTCTCCAGAAATCCCATTGGTTTGAGGTTCAGATTATGGTTCAGAAGGTCTGATTTACTTCCGAAAAGAGAATTGCGTGATAAGTAA | 3006 | 0.4291 | MDDAFARSIPEVLDFFGVDPTKGLSDIQVAQHCRLYGSNVLPEDQRAPFWKLVLKQFDDLLVKILIAAALISFVLALFNGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADVATALRNGCFSILPATELVPGDIVEVSVGCKIPADMRMIEMLSNQVRVDQAILTGESCSVEKELKTTTTTNAVYQDKTNILFSGTVMVAGRARAVVVGVGHNTAMGSIRDSMLRTEDEVTPLKKKLDEFGTFLAKVIAGICILVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKVCVVESAKRSPVVTEYSVSGTTYAPEGIIFDSRGMQLDFPAQLPCLLHIAMCSALCNESTLQYNPDKGKYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSNLERASYCNHYWEEQFRKVYILEFSRDRKMMSVLCGRNQLHVLFSKGAPESIVSRCTTILCNDDGSIVPLTADIRAELDSRFHSFAGKETLRCLALALKWMPSVQQTLSFDDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCHKIGAFDHLIDFAEHSYTASEFEELPALQQTIALQRMALFTRVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFASIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKMNEAVVTGWLFFRYLVIGAYVGLATVAGFIWWFVYSDSGPKLPYTELMNFDTCATRETTYPCSIFDDRHPSTVSMTVLVVVEMFNALNNLSENQSLVVIPPWSNLWLVASIILTMLLHILILYVHPLSVLFSVTPLSWADWMVVLYLSLPVIIIDEVLKFFSRNPIGLRFRLWFRRSDLLPKRELRDK | 1001 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Gabi3215g00027 | 1001 | Pfam | E1-E2 ATPase | 122 | 324 | - | - | |
| Gabi3215g00027 | 1001 | NCBIfam | calcium-translocating P-type ATPase, SERCA-type | 53 | 846 | IPR005782 | GO:0005388|GO:0006816|GO:0016020 | |
| Gabi3215g00027 | 1001 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 3 | 976 | IPR023298 | - | |
| Gabi3215g00027 | 1001 | Coils | Coil | 995 | 1001 | - | - | |
| Gabi3215g00027 | 1001 | SFLD | p-type atpase | 326 | 743 | IPR044492 | - | |
| Gabi3215g00027 | 1001 | Pfam | haloacid dehalogenase-like hydrolase | 582 | 705 | - | - | |
| Gabi3215g00027 | 1001 | Coils | Coil | 111 | 131 | - | - | |
| Gabi3215g00027 | 1001 | Pfam | Cation transporting ATPase, C-terminus | 775 | 974 | IPR006068 | - | |
| Gabi3215g00027 | 1001 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 347 | 353 | IPR018303 | - | |
| Gabi3215g00027 | 1001 | Gene3D | - | 22 | 237 | - | - |
Showing 1 to 10 of 38 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Gabi3215g00027 | K05853 | - | gmx:100783509 | 1867.05 |
Showing 1 to 1 of 1 entries