Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3215g00015 ATGTCCTTCCACGACGACGAAGCGGTCCAGTTCCCAAGCCCTCCGGTTCTCGAAACCATGCTGACAGAAAGTGAAATACAATCCCTGTTTTCCCTCATTAATCAATCTGGAGACCCGGCCAGCCCAAGCTCCGGTTCACAAGGATCAAACCGGGTGGTTTACTCGACAGAGGAAAGAAAGCTCAGGCGCATGCAGTCGAACCGGGATTCGGCCAGACGGTCCCGCTACAGAAAGAAGAAGCATTTAGAGAACCTCAGGAACCAAGTGAACCGGTTGAGAATTGAAAACCGAGAACTGAAAAACCGACTAGCCTACACCATGCATCAGCATCTCCTACTATCCCTACAGAATGATCAACTAAGATCCGAATCTGTTGCCCTTTTGGCCACACTTTCGGATCTATATGGGATTTTAGGCACCATGCTTTCACAATAG 435 0.492 MSFHDDEAVQFPSPPVLETMLTESEIQSLFSLINQSGDPASPSSGSQGSNRVVYSTEERKLRRMQSNRDSARRSRYRKKKHLENLRNQVNRLRIENRELKNRLAYTMHQHLLLSLQNDQLRSESVALLATLSDLYGILGTMLSQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3215g00015 144 Gene3D - 57 111 - -
Gabi3215g00015 144 PANTHER BZIP TRANSCRIPTION FACTOR 44 41 141 - -
Gabi3215g00015 144 CDD bZIP_plant_GBF1 60 110 IPR045314 GO:0003700|GO:0006355
Gabi3215g00015 144 Coils Coil 54 102 - -
Gabi3215g00015 144 Pfam bZIP transcription factor 58 103 IPR004827 GO:0003700|GO:0006355
Gabi3215g00015 144 FunFam BZIP transcription factor 57 109 - -
Gabi3215g00015 144 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 104 IPR004827 GO:0003700|GO:0006355
Gabi3215g00015 144 SUPERFAMILY Leucine zipper domain 59 111 IPR046347 GO:0003700|GO:0006355
Gabi3215g00015 144 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Gabi3215g00015 144 MobiDBLite consensus disorder prediction 55 71 - -
Gabi3215g00015 144 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
Gabi3215g00015 144 MobiDBLite consensus disorder prediction 34 76 - -
Gabi3215g00015 144 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3215g00015 Gabi-Chr3215 181656 182090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3215g00015 15 138 bZIP Transcription Factor Family AT3G49760 38.168 1.36e-20 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3215g00015 bZIP_1 3.7e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3215g00015 - - gmx:102661984 223.016