Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3214g00002 ATGTCTGAGGATTACCCATCAAAAGTTGGCCAGAAATCACAAGATCATCGTCAAGCAAAGACAACTTCAGTGTTACATTCAAGTGCTAATGAACCTGATGATTTACCCCTTGGGTTTGAAAGCAGTCATTTCCTGAACCAATCAAAGTTCAAATTTTCCCATATTTCCCAGATGAAATGGGAATGCCCTCCCCCGGTTATTCTCAATTCTGGTTGGCTTGTTGCGGCTGGTGAAGAAAGTAGGGAGAGAGAGGTTCAGAAGCTGAGAGAAAAGAGAGTGCTTGAAGCAGTTTATCCCCGTACTTCTGCCATTCCTCCTAGCCCTTCTGTTTTTTGGAATGTAGAAGAGGAAGAATATGATGATAACCTTACTCCTCTCATCCCTATGATTCCCATTGAGGAGCGAGAGTCTTTGGAGATTTCGCCCGAATTGGCAGTAGCAGCTAACCCTGCCCCCAATTTGCAGTCACAGAACTTGCAGCAATATATGTTGGCTATAACCCCCATCAATTCAGACTGTAATGCCTCCTGTACTGTTTCCTCGGATGCCTGTGCAGTGCCCTTATCTGGGATATCTCCTGACTTAGCAGCAGCCTCTGCTGTTGTAGCAGCCATCAATGAGCAAGGAAGCTTGATTGACATGGATCTACTCGTTAAAATACTTAATGACCCAAAATTGATTGAGAAACTGATTAATGAACAAAGAACTGCACCCACCACTATAAGTGCGTCCTCAAATAATAGGGGTATACCCACTTCTGGATTGAAACCTGCTATTCCATCAGTTCCGTTGTCTACTTCTGCACGTGATGCGGCAACTTCTAGGATTACTCCCACAAGTACAGTGGTTTTATTACCTTCTGGGTTGAAGCCTGCAACTCCATCAGTTTCATTGTTGAATCCCTCACCTGATAAGCCAGCAACTCTGTCAGTGTTAGCAATTCCATCAGGGTCACTGTTGTCGGCTACAAATGATAAGCCTGCGATTGCATCAGTTCCATTGTCTAGGCCTTTTCCTGGTAAACCCTCAATTCCATCAGGGTCACTGTTGTCGGCTATATATGATAAGCCAACGACTGCATCAGTTCCATTGTCCAGGCCTGTTCCTGGTAAACCAGCATTGCCACCAGTTTCAAAGTTGTCGGCTATGCATGATAAGCCAACAACCGCATCAGTTCCATTGTCTAGGCTTGTTTCTGGTAAACCAGCAATTCCATCACTGAGGGCTACACATGATAAGCCAGCAACTGCATCAGTTCCATTGTCTAGGCCTGTGCCAGGTAAACCAGTAACTCCAGTTTCTTTCCCTACACCTCCACCTGCACCTCATATGCACAGGCCTGTCAACCGAAACATTCATCATATTTCAAATGGAATGCCACCTGCTTTAAATAAGCAACCTCCTCAACAAGATGCAGTTCTGGCATCTGGGGTAAAGCGAGCTGCATCATTGGCTTCAATATCTTCTAGTGAATTAAGCTCGATTCCATTGCCTTATACTAATGGGAACTTGCATTCAGTTTTTAATCAGGCGCAATTCTCAGCTAGTATAACTCCTTATCCACTAAGTACAGGTTCAGCATTTCGGGTAAAGGATGTCAACTATTATAAAAACCTCATTAGGCGACATGGTGCTGCAGATAAGCAAGATATGCAGAACTCACAAATAGGTAACCATCATAGTAATTTCCAAGATTTGAAATTGGAACATAACATTAAACAAGGTGAAGCCAAACTCAAAATCCAGAAACCATGCATATACTTTAATAGCTCAAGAGGGTGCCGAAATGGTTCCAATTGCCTCTATCAGCATGATTTATGA 1821 0.4355 MSEDYPSKVGQKSQDHRQAKTTSVLHSSANEPDDLPLGFESSHFLNQSKFKFSHISQMKWECPPPVILNSGWLVAAGEESREREVQKLREKRVLEAVYPRTSAIPPSPSVFWNVEEEEYDDNLTPLIPMIPIEERESLEISPELAVAANPAPNLQSQNLQQYMLAITPINSDCNASCTVSSDACAVPLSGISPDLAAASAVVAAINEQGSLIDMDLLVKILNDPKLIEKLINEQRTAPTTISASSNNRGIPTSGLKPAIPSVPLSTSARDAATSRITPTSTVVLLPSGLKPATPSVSLLNPSPDKPATLSVLAIPSGSLLSATNDKPAIASVPLSRPFPGKPSIPSGSLLSAIYDKPTTASVPLSRPVPGKPALPPVSKLSAMHDKPTTASVPLSRLVSGKPAIPSLRATHDKPATASVPLSRPVPGKPVTPVSFPTPPPAPHMHRPVNRNIHHISNGMPPALNKQPPQQDAVLASGVKRAASLASISSSELSSIPLPYTNGNLHSVFNQAQFSASITPYPLSTGSAFRVKDVNYYKNLIRRHGAADKQDMQNSQIGNHHSNFQDLKLEHNIKQGEAKLKIQKPCIYFNSSRGCRNGSNCLYQHDL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3214g00002 606 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 605 - -
Gabi3214g00002 606 MobiDBLite consensus disorder prediction 1 37 - -
Gabi3214g00002 606 MobiDBLite consensus disorder prediction 238 252 - -
Gabi3214g00002 606 MobiDBLite consensus disorder prediction 238 272 - -
Gabi3214g00002 606 ProSiteProfiles Zinc finger C3H1-type profile. 579 606 IPR000571 GO:0046872
Gabi3214g00002 606 MobiDBLite consensus disorder prediction 405 427 - -
Gabi3214g00002 606 MobiDBLite consensus disorder prediction 360 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3214g00002 Gabi-Chr3214 30529 35302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3214g00002 47 128 Homeobox Transcription Factor Family AT4G02560 40.244 1.46e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gabi3214g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3214g00002 - - cam:101501407 470.7